BLASTX nr result

ID: Cnidium21_contig00032077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032077
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530585.1| nascent polypeptide associated complex alpha...   112   5e-23
emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]    59   1e-06

>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 687

 Score =  112 bits (281), Expect = 5e-23
 Identities = 60/136 (44%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
 Frame = +1

Query: 226 EERAIPNTTLLHDLGYHLSAYTRAGRGPPTQNLNCRGAWCNAIKLYRKANDRYKELFIAA 405
           +  A+  T LL  L  H S Y R G+  P  NL  +  W  A K+   A   YK L + A
Sbjct: 188 QRHAVQPTPLLTGLKSHPSIYIRLGQRLPESNLVSQNNWTRAFKICSNAAVEYKRLLLDA 247

Query: 406 GFGDFLKIEPVEVPVA-YSLALLERWFGKTNTLHLPSCEIGPTPVDWTMVTGIPFGGRSI 582
           GFGDFL I+P  +    Y  AL+ER+F +T+TLHL + EIGPTP+ WTM+TGI FGG  +
Sbjct: 248 GFGDFLSIQPFRINSGGYMSALVERYFSETHTLHLGTFEIGPTPLAWTMITGITFGGDPL 307

Query: 583 GVKPITMNRALELLGV 630
               IT    ++LLG+
Sbjct: 308 NPPDITPEECIKLLGL 323


>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
          Length = 689

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
 Frame = +1

Query: 235 AIPNTTLLHDLGYHLSAYTRAGRGPPTQNLNCRGAWCNAIKLYRKANDRYKELFIAAGFG 414
           A  + TLL D   H+S +   G   P     C G+     + Y K +   K+    AGFG
Sbjct: 27  ACQSPTLLKDPHKHISRHGLRGEILPKGLKTC-GSSIALTQWYDKLDPVVKQKVDNAGFG 85

Query: 415 DFL-------KIEPVEVPVAYSLALLERWFGKTNTLHLPSCEIGPTPVDWTMVTGIPFGG 573
            F+       + E V V     ++L ERW+  T TLH P  E+G TP D++++TG+  GG
Sbjct: 86  RFISSLCPSSRAEKVRV-----ISLAERWWDTTGTLHFPFGEVGMTPYDFSVITGLRIGG 140

Query: 574 RSI 582
           + I
Sbjct: 141 KPI 143


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