BLASTX nr result
ID: Cnidium21_contig00032074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00032074
(745 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15530.3| unnamed protein product [Vitis vinifera] 113 4e-23
ref|XP_002280982.1| PREDICTED: eukaryotic peptide chain release ... 113 4e-23
ref|NP_001185026.1| G1 to S phase transition protein [Arabidopsi... 112 1e-22
ref|NP_173247.1| G1 to S phase transition protein [Arabidopsis t... 112 1e-22
ref|XP_002892982.1| hypothetical protein ARALYDRAFT_472022 [Arab... 111 1e-22
>emb|CBI15530.3| unnamed protein product [Vitis vinifera]
Length = 8416
Score = 113 bits (283), Expect = 4e-23
Identities = 72/149 (48%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Frame = +1
Query: 304 VSAPTTTENAKLRHLNVVFIGHYDAGKTTIGSQILTGAGQFCELP-RKWQKEA-DPNAVK 477
+ P E K RHLNVVFIGH DAGK+T G QIL +GQ + +K++KEA D +
Sbjct: 7973 IEGPEDAEGYKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRES 8032
Query: 478 WIRGRIVKNEVRKPDSRGKFGNFRVEEVTTKKTTIHTWGRADEVGRADFQTERTRFTFLD 657
W I+ EE K T+ EVGRA F+TE TRFT LD
Sbjct: 8033 WYMAYIMDTN---------------EEERVKGKTV-------EVGRAHFETETTRFTILD 8070
Query: 658 PPGHEKYVPDMIIVASQADIGVLVISARK 744
PGH+ YVP+MI ASQADIGVLVISARK
Sbjct: 8071 APGHKSYVPNMISGASQADIGVLVISARK 8099
>ref|XP_002280982.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding
subunit ERF3B-like [Vitis vinifera]
Length = 512
Score = 113 bits (283), Expect = 4e-23
Identities = 72/149 (48%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Frame = +1
Query: 304 VSAPTTTENAKLRHLNVVFIGHYDAGKTTIGSQILTGAGQFCELP-RKWQKEA-DPNAVK 477
+ P E K RHLNVVFIGH DAGK+T G QIL +GQ + +K++KEA D +
Sbjct: 69 IEGPEDAEGYKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRES 128
Query: 478 WIRGRIVKNEVRKPDSRGKFGNFRVEEVTTKKTTIHTWGRADEVGRADFQTERTRFTFLD 657
W I+ EE K T+ EVGRA F+TE TRFT LD
Sbjct: 129 WYMAYIMDTN---------------EEERVKGKTV-------EVGRAHFETETTRFTILD 166
Query: 658 PPGHEKYVPDMIIVASQADIGVLVISARK 744
PGH+ YVP+MI ASQADIGVLVISARK
Sbjct: 167 APGHKSYVPNMISGASQADIGVLVISARK 195
>ref|NP_001185026.1| G1 to S phase transition protein [Arabidopsis thaliana]
gi|9719722|gb|AAF97824.1|AC034107_7 Strong similarity to
EF-1-alpha-related GTP-binding protein (SUP1) from
Nicotiana tabacum gb|L38828 and is a member of the
elongation factor Tu PF|00009 family. ESTs gb|W43190,
gb|W43332, gb|AI995372, gb|AV563399, gb|AV549134,
gb|AV554843, gb|AV527836 come from this gene
[Arabidopsis thaliana] gi|332191551|gb|AEE29672.1| G1 to
S phase transition protein [Arabidopsis thaliana]
Length = 543
Score = 112 bits (279), Expect = 1e-22
Identities = 73/147 (49%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +1
Query: 310 APTTTENAKLRHLNVVFIGHYDAGKTTIGSQILTGAGQFCELP-RKWQKEA-DPNAVKWI 483
A E K RHLNVVFIGH DAGK+TIG QIL +GQ + +K++KEA D + W
Sbjct: 90 AEDVAEANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWY 149
Query: 484 RGRIVKNEVRKPDSRGKFGNFRVEEVTTKKTTIHTWGRADEVGRADFQTERTRFTFLDPP 663
I+ EE K T+ EVGRA F+TE TRFT LD P
Sbjct: 150 MAYIMDTN---------------EEERLKGKTV-------EVGRAHFETESTRFTILDAP 187
Query: 664 GHEKYVPDMIIVASQADIGVLVISARK 744
GH+ YVP+MI ASQADIGVLVISARK
Sbjct: 188 GHKSYVPNMISGASQADIGVLVISARK 214
>ref|NP_173247.1| G1 to S phase transition protein [Arabidopsis thaliana]
gi|79318119|ref|NP_001031063.1| G1 to S phase transition
protein [Arabidopsis thaliana]
gi|21539549|gb|AAM53327.1| putative guanine nucleotide
regulatory protein [Arabidopsis thaliana]
gi|31711944|gb|AAP68328.1| At1g18070 [Arabidopsis
thaliana] gi|332191549|gb|AEE29670.1| G1 to S phase
transition protein [Arabidopsis thaliana]
gi|332191550|gb|AEE29671.1| G1 to S phase transition
protein [Arabidopsis thaliana]
Length = 532
Score = 112 bits (279), Expect = 1e-22
Identities = 73/147 (49%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +1
Query: 310 APTTTENAKLRHLNVVFIGHYDAGKTTIGSQILTGAGQFCELP-RKWQKEA-DPNAVKWI 483
A E K RHLNVVFIGH DAGK+TIG QIL +GQ + +K++KEA D + W
Sbjct: 90 AEDVAEANKKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWY 149
Query: 484 RGRIVKNEVRKPDSRGKFGNFRVEEVTTKKTTIHTWGRADEVGRADFQTERTRFTFLDPP 663
I+ EE K T+ EVGRA F+TE TRFT LD P
Sbjct: 150 MAYIMDTN---------------EEERLKGKTV-------EVGRAHFETESTRFTILDAP 187
Query: 664 GHEKYVPDMIIVASQADIGVLVISARK 744
GH+ YVP+MI ASQADIGVLVISARK
Sbjct: 188 GHKSYVPNMISGASQADIGVLVISARK 214
>ref|XP_002892982.1| hypothetical protein ARALYDRAFT_472022 [Arabidopsis lyrata subsp.
lyrata] gi|297338824|gb|EFH69241.1| hypothetical protein
ARALYDRAFT_472022 [Arabidopsis lyrata subsp. lyrata]
Length = 533
Score = 111 bits (278), Expect = 1e-22
Identities = 73/147 (49%), Positives = 85/147 (57%), Gaps = 2/147 (1%)
Frame = +1
Query: 310 APTTTENAKLRHLNVVFIGHYDAGKTTIGSQILTGAGQFCELP-RKWQKEA-DPNAVKWI 483
A E K RHLNVVFIGH DAGK+TIG QIL +GQ E +K++KEA D + W
Sbjct: 91 AEDEAEANKKRHLNVVFIGHVDAGKSTIGGQILYLSGQVDERQIQKYEKEAKDKSRESWY 150
Query: 484 RGRIVKNEVRKPDSRGKFGNFRVEEVTTKKTTIHTWGRADEVGRADFQTERTRFTFLDPP 663
I+ EE K T+ EVGRA F+T+ TRFT LD P
Sbjct: 151 MAYIMDTN---------------EEERLKGKTV-------EVGRAHFETQSTRFTILDAP 188
Query: 664 GHEKYVPDMIIVASQADIGVLVISARK 744
GH+ YVP+MI ASQADIGVLVISARK
Sbjct: 189 GHKSYVPNMISGASQADIGVLVISARK 215