BLASTX nr result

ID: Cnidium21_contig00032021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032021
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307567.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus tric...   102   3e-20
gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Popu...   102   3e-20
gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Popu...   102   4e-20
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...    99   4e-19

>ref|XP_002307567.1| predicted protein [Populus trichocarpa] gi|222857016|gb|EEE94563.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/103 (52%), Positives = 71/103 (68%)
 Frame = +2

Query: 2   LTTTPDFSRIPCIEDLNLSGCTDVVEVDPSIGCLVRLVNLNLMGCTKLKCLPSSICNLIA 181
           LT TP+F  +PC+E L L  C  +VEV  SIG L RL+ LN   C  LK LP SIC L +
Sbjct: 81  LTKTPNFEGLPCLEKLILKDCVSLVEVHDSIGILGRLLLLNFKNCKSLKTLPGSICALSS 140

Query: 182 LEQLDLDGCSSLEGLPDRLGNMKSLSILRAGCTAITTVPGSIG 310
           L++L++ GC  LEGLP+ LG++KSL +L A  TAI+T+P +IG
Sbjct: 141 LKKLNVSGCLKLEGLPEDLGSLKSLVVLLADGTAISTIPETIG 183


>ref|XP_002328629.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222838611|gb|EEE76976.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1121

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/103 (51%), Positives = 67/103 (65%)
 Frame = +2

Query: 2   LTTTPDFSRIPCIEDLNLSGCTDVVEVDPSIGCLVRLVNLNLMGCTKLKCLPSSICNLIA 181
           L  TPDF ++P +E LNL GC  +V++D SIG L  LV LNL  C KL CLP++IC L  
Sbjct: 639 LIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKT 698

Query: 182 LEQLDLDGCSSLEGLPDRLGNMKSLSILRAGCTAITTVPGSIG 310
           L  L+L GC  LE LP+ LGN+ +L  L  G TAIT +P + G
Sbjct: 699 LRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFG 741


>gb|ABF81419.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1121

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/103 (51%), Positives = 67/103 (65%)
 Frame = +2

Query: 2   LTTTPDFSRIPCIEDLNLSGCTDVVEVDPSIGCLVRLVNLNLMGCTKLKCLPSSICNLIA 181
           L  TPDF ++P +E LNL GC  +V++D SIG L  LV LNL  C KL CLP++IC L  
Sbjct: 669 LIKTPDFRQVPNLEKLNLEGCRKLVKIDDSIGILKGLVFLNLKDCVKLACLPTNICELKT 728

Query: 182 LEQLDLDGCSSLEGLPDRLGNMKSLSILRAGCTAITTVPGSIG 310
           L  L+L GC  LE LP+ LGN+ +L  L  G TAIT +P + G
Sbjct: 729 LRILNLYGCFKLEKLPEMLGNVINLEELDVGRTAITQLPSTFG 771


>gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/103 (52%), Positives = 69/103 (66%)
 Frame = +2

Query: 2    LTTTPDFSRIPCIEDLNLSGCTDVVEVDPSIGCLVRLVNLNLMGCTKLKCLPSSICNLIA 181
            L+T P F  +PC+E + L GCT +VEV  SIG L  L  LNL GC  LK LP SIC L  
Sbjct: 723  LSTPPHFMGLPCLERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCKSLKNLPESICYLKC 782

Query: 182  LEQLDLDGCSSLEGLPDRLGNMKSLSILRAGCTAITTVPGSIG 310
            LE L++  C +LE LPD+LG+M++L++L A  TAI  +P SIG
Sbjct: 783  LESLNISRCINLEKLPDQLGDMEALTMLLADGTAIERLPSSIG 825


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/102 (50%), Positives = 66/102 (64%)
 Frame = +2

Query: 2   LTTTPDFSRIPCIEDLNLSGCTDVVEVDPSIGCLVRLVNLNLMGCTKLKCLPSSICNLIA 181
           LT TPDFS  P +  + L+GCT +V++ PSIG L  L+ LNL GC+KL+ LP SIC LI+
Sbjct: 634 LTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLENLPQSICELIS 693

Query: 182 LEQLDLDGCSSLEGLPDRLGNMKSLSILRAGCTAITTVPGSI 307
           L+ L L GCS L+ LPD LG ++ L  L    T I  V  SI
Sbjct: 694 LQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSI 735


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