BLASTX nr result

ID: Cnidium21_contig00032013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032013
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94932.1| unknown [Populus trichocarpa]                          141   6e-32
ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
emb|CBI19489.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [...   135   3e-30
ref|XP_002518733.1| polyadenylate-binding protein, putative [Ric...   135   4e-30

>gb|ABK94932.1| unknown [Populus trichocarpa]
          Length = 408

 Score =  141 bits (355), Expect = 6e-32
 Identities = 81/138 (58%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = -3

Query: 418 ALSEMNGKMVGNKPLSVAFAQRKEDRRAGHQQEQYSNMHPVGMT-SVXXXXXXXXXXXXG 242
           AL EMNGKMV +KPL VA AQRKEDRRA   Q Q+S M PV M  SV             
Sbjct: 128 ALLEMNGKMVASKPLYVALAQRKEDRRA-RLQAQFSQMRPVAMAPSVGRMPMYPPTGPGL 186

Query: 241 LQQIFYAQGHPAFIPPQPGFGYPTQFVPGMRPSGAPMPNFFVPVAQLGQQVLRPAGSRPA 62
            QQIFY QG PA +PPQPGFGY  Q VPGMRP GAPMPNFFVP+ Q GQQ  RP G R  
Sbjct: 187 GQQIFYGQGPPAIMPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRRAG 246

Query: 61  GIIAGLHAQQGVSPMQPQ 8
               G  +QQ V  MQ Q
Sbjct: 247 ---TGQQSQQPVQLMQQQ 261


>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
           predicted protein [Populus trichocarpa]
          Length = 644

 Score =  137 bits (344), Expect = 1e-30
 Identities = 83/139 (59%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
 Frame = -3

Query: 418 ALSEMNGKMVGNKPLSVAFAQRKEDRRAGHQQEQYSNMHPVGMT-SVXXXXXXXXXXXXG 242
           AL EMNGK+V +KPL VA AQRKEDRRA   Q Q+S M PV M  SV            G
Sbjct: 363 ALLEMNGKIVVSKPLYVALAQRKEDRRA-RLQAQFSQMRPVAMAPSVGPRMPMYPPAGPG 421

Query: 241 L-QQIFYAQGHPAFIPPQPGFGYPTQFVPGMRPSGAPMPNFFVPVAQLGQQVLRPAGSRP 65
           L QQIFY Q  PA IPPQPGFGY  Q VPGMRP GAPMPNFFVP+ Q GQQ  RP G R 
Sbjct: 422 LGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRRA 481

Query: 64  AGIIAGLHAQQGVSPMQPQ 8
               AG  +QQ V  MQ Q
Sbjct: 482 G---AGQQSQQPVPLMQQQ 497


>emb|CBI19489.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  135 bits (341), Expect = 3e-30
 Identities = 82/139 (58%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
 Frame = -3

Query: 418 ALSEMNGKMVGNKPLSVAFAQRKEDRRAGHQQEQYSNMHPVGMT-SVXXXXXXXXXXXXG 242
           AL+EMNGKMV +KPL VA AQRKE+RRA   Q Q+S M PV M  SV            G
Sbjct: 356 ALTEMNGKMVVSKPLYVALAQRKEERRA-RLQAQFSQMRPVSMAPSVAPRMPMYPPGAPG 414

Query: 241 L-QQIFYAQGHPAFIPPQPGFGYPTQFVPGMRPSGAPMPNFFVPVAQLGQQVLRPAGSRP 65
           L QQ+FY QG PA IPPQ GFGY  Q VPGMRP GAPMPNFFVP+ Q GQQ  RP G R 
Sbjct: 415 LGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQRPGGRRG 474

Query: 64  AGIIAGLHAQQGVSPMQPQ 8
           AG +     QQ V  MQ Q
Sbjct: 475 AGPVQ--QNQQPVPLMQQQ 491


>ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147773643|emb|CAN76464.1| hypothetical protein
           VITISV_017035 [Vitis vinifera]
          Length = 640

 Score =  135 bits (341), Expect = 3e-30
 Identities = 82/139 (58%), Positives = 89/139 (64%), Gaps = 2/139 (1%)
 Frame = -3

Query: 418 ALSEMNGKMVGNKPLSVAFAQRKEDRRAGHQQEQYSNMHPVGMT-SVXXXXXXXXXXXXG 242
           AL+EMNGKMV +KPL VA AQRKE+RRA   Q Q+S M PV M  SV            G
Sbjct: 356 ALTEMNGKMVVSKPLYVALAQRKEERRA-RLQAQFSQMRPVSMAPSVAPRMPMYPPGAPG 414

Query: 241 L-QQIFYAQGHPAFIPPQPGFGYPTQFVPGMRPSGAPMPNFFVPVAQLGQQVLRPAGSRP 65
           L QQ+FY QG PA IPPQ GFGY  Q VPGMRP GAPMPNFFVP+ Q GQQ  RP G R 
Sbjct: 415 LGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQRPGGRRG 474

Query: 64  AGIIAGLHAQQGVSPMQPQ 8
           AG +     QQ V  MQ Q
Sbjct: 475 AGPVQ--QNQQPVPLMQQQ 491


>ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223542114|gb|EEF43658.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 644

 Score =  135 bits (339), Expect = 4e-30
 Identities = 82/139 (58%), Positives = 87/139 (62%), Gaps = 2/139 (1%)
 Frame = -3

Query: 418 ALSEMNGKMVGNKPLSVAFAQRKEDRRAGHQQEQYSNMHPVGMT-SVXXXXXXXXXXXXG 242
           AL EMNGKMV +KPL VA AQRKEDRRA   Q Q+S + PV M  SV            G
Sbjct: 362 ALMEMNGKMVVSKPLYVALAQRKEDRRA-RLQAQFSQIRPVAMAPSVAPRMPMYPPGGPG 420

Query: 241 L-QQIFYAQGHPAFIPPQPGFGYPTQFVPGMRPSGAPMPNFFVPVAQLGQQVLRPAGSRP 65
           L QQIFY Q  PA IPPQPGFGY  Q VPGMRP GAPMPNFFVP+ Q GQQ  RP G R 
Sbjct: 421 LGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRRA 480

Query: 64  AGIIAGLHAQQGVSPMQPQ 8
               A   +QQ V  MQ Q
Sbjct: 481 G---AAQQSQQPVPLMQQQ 496


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