BLASTX nr result

ID: Cnidium21_contig00032010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032010
         (1291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518086.1| conserved hypothetical protein [Ricinus comm...   321   2e-85
ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   305   1e-80
emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]   305   1e-80
ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   288   3e-75
ref|XP_002323779.1| predicted protein [Populus trichocarpa] gi|2...   281   2e-73

>ref|XP_002518086.1| conserved hypothetical protein [Ricinus communis]
            gi|223542682|gb|EEF44219.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1006

 Score =  321 bits (823), Expect = 2e-85
 Identities = 183/397 (46%), Positives = 236/397 (59%), Gaps = 14/397 (3%)
 Frame = +1

Query: 31   SPVGYEQDPMDFGGFGDLFNEPEVVEGPLMMPLNRNEAVGTGTIFGNSSGSDLDEIDNTG 210
            S VG  QD  DF GFGDLFNEPEV  GP+  P   N    TG I  N+S SD DE+DN+ 
Sbjct: 610  SVVGCGQDEADFDGFGDLFNEPEVSSGPVSGPSLANGTAETGFIAANNSESDPDEVDNSD 669

Query: 211  APISVEKCVSYFTKPELLLKDEHAWHCENCSKILLEQR-RLMKAGKVKSNVSLNGGVDRV 387
            +P+S+E C+++F KPELL  D +AW CENCSK L  QR    K  K      + GG  ++
Sbjct: 670  SPVSIESCLAHFIKPELLSND-NAWECENCSKTLQRQRLEAKKKAKTTVETMIIGGKAQI 728

Query: 388  QDPVLGSGKHDPLPIGSMNLSNGNNKSDVLDPLSEKLISSNVSIDG-DLNCISESNQKPD 564
            Q P     K +   I   + + G N     +     L+S + +ID  + N I   + + D
Sbjct: 729  QSPS-SLEKDNLCSIEVKDHNGGINTDTCFNSSGASLVSDDENIDRTNQNYIKTESGQTD 787

Query: 565  DHLPVEPLLEEEKSKIGVAFQKLTINGENSND------------SCNINESGGAGCDTNN 708
            +  P+E   +E+K ++ VA  + +++                  S ++ E    G  T  
Sbjct: 788  ELNPIETQGDEQKGEMTVALMEQSLSSSTYKSCSQESFSCPVVGSSSVGEPSSTGYATAK 847

Query: 709  SQQSKPNSPPXXXXXXXXXXXXXXXXIKVKRDATKRILIERAPPILTIHLKRFSQDARGR 888
             Q    +S                  +KVKRDATKR+L+++APPILTIHLKRFSQDARGR
Sbjct: 848  DQMG--DSQFSGNCGAKEDEEGTSRKVKVKRDATKRVLVDKAPPILTIHLKRFSQDARGR 905

Query: 889  ISKLQGHVDFGDMVDLRPYMNPRCTEKRSCIYRLLGVVEHLGTMRGGHYVAYVRGGIKNN 1068
            +SKL GHV+FGD++DLRPYM+PRCT++   +YRLLGVVEHLGTMRGGHYVAYVRGG K+ 
Sbjct: 906  LSKLNGHVNFGDVLDLRPYMDPRCTDREKYVYRLLGVVEHLGTMRGGHYVAYVRGGQKSK 965

Query: 1069 VETEKASSGDYTWYHASDAYVSQVSFEEVLRCEAYIL 1179
             + E   SG   WYHASDAYV +VS EEVLRCEAYIL
Sbjct: 966  GKAEN-ESGSSVWYHASDAYVREVSLEEVLRCEAYIL 1001


>ref|XP_002265806.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 1-like [Vitis
            vinifera]
          Length = 950

 Score =  305 bits (782), Expect = 1e-80
 Identities = 182/412 (44%), Positives = 239/412 (58%), Gaps = 22/412 (5%)
 Frame = +1

Query: 10   SVAEVEPSPV-GYEQDPMDFGGFGDLFNEPEVVEGPLMMPL------NRNEAVGTGTIFG 168
            +  +V PS V G  ++ +DF GFG LF+EPE   G  + PL      N NE VGTG I  
Sbjct: 537  TTGQVGPSVVSGSNEELLDFDGFGGLFDEPEAASGVNLQPLLGDNSFNANEVVGTGFINR 596

Query: 169  NSSGSDLDEIDNTGAPISVEKCVSYFTKPELLLKDEHAWHCENCSKILLEQRRLMKAG-- 342
            NSS SD DE+DN+ + +S++ C++YFTKPELL  +EHAWHCENCSKIL +QR   +    
Sbjct: 597  NSSESDPDEVDNSNSMVSIDSCLTYFTKPELL-SNEHAWHCENCSKILWDQRIKTRTNLP 655

Query: 343  KVKSNVSLNGGVDRVQDPVLGSGKHDPLPIGSMNLSNGNNKSDVLDPLSEKLISSNVSID 522
               S + +NG   ++Q+   G  K D  P    ++ N N K+D  + L        +S D
Sbjct: 656  NTISKIQMNGSEGKIQNGPFGLCK-DISPDEVKDIDNENVKNDGHNILGGLAPHDRISDD 714

Query: 523  GDL-NCISESNQKPDDHLPVEPLLEEEKSKIGVAFQKLTINGEN------------SNDS 663
                N +     +  +  PV    E  KSK+  A  +L+ + +             ++DS
Sbjct: 715  DSKQNGLKLQTSQTVEVNPVVSQCEGGKSKMNYALPELSHSSDTYKTCSQASLSDPASDS 774

Query: 664  CNINESGGAGCDTNNSQQSKPNSPPXXXXXXXXXXXXXXXXIKVKRDATKRILIERAPPI 843
            C+++E    GC+T   + S+  +                  +KVKRDATKRILI +APPI
Sbjct: 775  CSVHEPNSVGCNTGKQRNSQMLTGELESEEDEDKEMDSES-VKVKRDATKRILINKAPPI 833

Query: 844  LTIHLKRFSQDARGRISKLQGHVDFGDMVDLRPYMNPRCTEKRSCIYRLLGVVEHLGTMR 1023
            LTIHLKRFSQDARGR +KL GHV F D +DLRP+M PRC EK    YRL+GVVEH G+MR
Sbjct: 834  LTIHLKRFSQDARGRYNKLNGHVVFKDSIDLRPFMEPRCVEKGKYEYRLVGVVEHSGSMR 893

Query: 1024 GGHYVAYVRGGIKNNVETEKASSGDYTWYHASDAYVSQVSFEEVLRCEAYIL 1179
             GHYVAYVRGG + +    K  SG   WY+ASDA V + S +EVLRCEAYIL
Sbjct: 894  MGHYVAYVRGGERRSSGQAKKESGRGVWYYASDASVRETSLDEVLRCEAYIL 945


>emb|CAN67276.1| hypothetical protein VITISV_042515 [Vitis vinifera]
          Length = 1036

 Score =  305 bits (782), Expect = 1e-80
 Identities = 182/412 (44%), Positives = 239/412 (58%), Gaps = 22/412 (5%)
 Frame = +1

Query: 10   SVAEVEPSPV-GYEQDPMDFGGFGDLFNEPEVVEGPLMMPL------NRNEAVGTGTIFG 168
            +  +V PS V G  ++ +DF GFG LF+EPE   G  + PL      + NE VGTG I  
Sbjct: 623  TTGQVGPSVVSGSNEELLDFDGFGGLFDEPEAASGVNLQPLLGDNSFDANEVVGTGFINR 682

Query: 169  NSSGSDLDEIDNTGAPISVEKCVSYFTKPELLLKDEHAWHCENCSKILLEQRRLMKAG-- 342
            NSS SD DE+DN+ + +S++ C++YFTKPELL  +EHAWHCENCSKIL +QR   +    
Sbjct: 683  NSSESDPDEVDNSNSMVSIDSCLTYFTKPELL-SNEHAWHCENCSKILRDQRIKTRTNLP 741

Query: 343  KVKSNVSLNGGVDRVQDPVLGSGKHDPLPIGSMNLSNGNNKSDVLDPLSEKLISSNVSID 522
               S + +NG  D++Q+   G  K D  P    ++ N N K+D  + L        +S D
Sbjct: 742  NTISKIQMNGSEDKIQNGPFGLCK-DISPDEVKDIDNENVKNDGHNILGGLAPHDRISDD 800

Query: 523  GDL-NCISESNQKPDDHLPVEPLLEEEKSKIGVAFQKLTINGEN------------SNDS 663
                N +     +  +  PV    E  KSK+  A   L+ + +             ++DS
Sbjct: 801  DSKQNGLKLQTSQTVEVNPVVSQCEGGKSKMNYALPDLSHSSDTYKTCSQASLSDPASDS 860

Query: 664  CNINESGGAGCDTNNSQQSKPNSPPXXXXXXXXXXXXXXXXIKVKRDATKRILIERAPPI 843
            C+++E    GC+T   + S+  +                  +KVKRDATKRILI +APPI
Sbjct: 861  CSVHEPNSVGCNTGKQRNSQMLTGELESEEDEDKEMDSES-VKVKRDATKRILINKAPPI 919

Query: 844  LTIHLKRFSQDARGRISKLQGHVDFGDMVDLRPYMNPRCTEKRSCIYRLLGVVEHLGTMR 1023
            LTIHLKRFSQDARGR +KL GHV F D +DLRP+M PRC EK    YRL+GVVEH G+MR
Sbjct: 920  LTIHLKRFSQDARGRYNKLNGHVVFKDSIDLRPFMEPRCVEKGKYEYRLVGVVEHSGSMR 979

Query: 1024 GGHYVAYVRGGIKNNVETEKASSGDYTWYHASDAYVSQVSFEEVLRCEAYIL 1179
             GHYVAYVRGG + +    K  SG   WY+ASDA V + S +EVLRCEAYIL
Sbjct: 980  MGHYVAYVRGGERKSSGQAKKESGRGVWYYASDASVRETSLDEVLRCEAYIL 1031


>ref|XP_003552761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Glycine max]
          Length = 980

 Score =  288 bits (736), Expect = 3e-75
 Identities = 169/401 (42%), Positives = 233/401 (58%), Gaps = 9/401 (2%)
 Frame = +1

Query: 4    SNSVAEV-------EPSPVGYEQDPMDFGGFGDLFNEPEVVEGPLMMPLNRNEAVGTGTI 162
            S+S AE+         S +G  Q+ ++F GFGDLFNEPEVV GP   P + +E +  G I
Sbjct: 594  SSSAAEIIGGDGEGSSSVLGGGQEELEFDGFGDLFNEPEVVAGPAPRPSSCSEVMEAGFI 653

Query: 163  FGNSSGSDLDEIDNTGAPISVEKCVSYFTKPELLLKDEHAWHCENCSKILLEQRRLMKAG 342
             G++S SD DE+D+T +P+SVE C+++F KPELL  DE+AWHCENCSK+L  Q+  M+  
Sbjct: 654  IGSNSESDPDEVDDTDSPVSVESCLAHFIKPELL-SDENAWHCENCSKVLQHQK--MEEK 710

Query: 343  KVKSNVSLNGGVDRVQDP--VLGSGKHDPLPIGSMNLSNGNNKSDVLDPLSEKLISSNVS 516
            K    VS         +P   + S       IG+ ++ N  N  +++     K    N  
Sbjct: 711  KQARAVSDRNETGIHDEPWHAVNSCSVKVRTIGNGDIKNDQNVQNLVACDKHKTNLENGQ 770

Query: 517  IDGDLNCISESNQKPDDHLPVEPLLEEEKSKIGVAFQKLTINGENSNDSCNINESGGAGC 696
             D +L+ I   N+K      +E    +E            +   + +++CN         
Sbjct: 771  RD-ELSLIV--NEKDSGSFEMEDTHNDE------------LQSSSFHNTCNEESCSHLAV 815

Query: 697  DTNNSQQSKPNSPPXXXXXXXXXXXXXXXXIKVKRDATKRILIERAPPILTIHLKRFSQD 876
            D+  ++  +    P                +KVKRDATKR+LI +APP+LTIHLKRFSQD
Sbjct: 816  DSCVTENVQRRDSPMIGSDNNDSEEADSKSVKVKRDATKRVLIYKAPPVLTIHLKRFSQD 875

Query: 877  ARGRISKLQGHVDFGDMVDLRPYMNPRCTEKRSCIYRLLGVVEHLGTMRGGHYVAYVRGG 1056
            ARGR+SKL GHV+F + +D+RPY++PRC  +    Y L+G+VEH GTMRGGHYVAYVRGG
Sbjct: 876  ARGRLSKLNGHVNFRETMDIRPYIDPRCINEEKYAYHLVGLVEHSGTMRGGHYVAYVRGG 935

Query: 1057 IKNNVETEKASSGDYTWYHASDAYVSQVSFEEVLRCEAYIL 1179
             +N  + +K + G  TWY ASDAYV +VS +EVLRCEAYIL
Sbjct: 936  QRNCGKGDKENEGS-TWYQASDAYVREVSLDEVLRCEAYIL 975


>ref|XP_002323779.1| predicted protein [Populus trichocarpa] gi|222866781|gb|EEF03912.1|
            predicted protein [Populus trichocarpa]
          Length = 910

 Score =  281 bits (720), Expect = 2e-73
 Identities = 168/397 (42%), Positives = 218/397 (54%), Gaps = 9/397 (2%)
 Frame = +1

Query: 16   AEVEPSPVGYEQDPMDFGGFGDLFNEPEVVEGPLMMPLNRNEAVGTGTIFGNSSGSDLDE 195
            AE   S VG EQD  +F G GDLFNEPEV   P+  P   NE  G   I G  S SD DE
Sbjct: 578  AEASSSFVGCEQDEAEFDGIGDLFNEPEVSAAPVAGPSLPNEVAGPVFIAGIGSESDPDE 637

Query: 196  IDNTGAPISVEKCVSYFTKPELLLKDEHAWHCENCSKILLEQR--RLMKAGKVKSNVSLN 369
            +D+T +P+S+E C+S+F KPELL  D +AW CENCSKIL +QR     K  K+ S   LN
Sbjct: 638  VDDTDSPVSIESCLSHFVKPELLSND-NAWECENCSKILQQQRLDAKKKQAKISSKTLLN 696

Query: 370  GGVDRVQDPVLGSGKHDPLPIGSMNLSNGNNKSDVLDPLSEKLISSNVSIDGDLNCISES 549
            GG D      +                    +++++    E  IS +             
Sbjct: 697  GGNDSSNKKFI--------------------QAEIVQTEMEPFISQS------------- 723

Query: 550  NQKPDDHLPVEPLLEEEKSKIGVAFQK---LTINGENSN----DSCNINESGGAGCDTNN 708
                          EE K ++ V+       + NGE  +    DSC+++E+     D + 
Sbjct: 724  --------------EERKYEMNVSHSSGYYESCNGETLSGPPVDSCSVDETRDVNEDEDK 769

Query: 709  SQQSKPNSPPXXXXXXXXXXXXXXXXIKVKRDATKRILIERAPPILTIHLKRFSQDARGR 888
            + +                       + VKRDATKR+LI++APPILTIHLKRFSQDARGR
Sbjct: 770  TSKK----------------------LNVKRDATKRVLIDKAPPILTIHLKRFSQDARGR 807

Query: 889  ISKLQGHVDFGDMVDLRPYMNPRCTEKRSCIYRLLGVVEHLGTMRGGHYVAYVRGGIKNN 1068
            + KL GHV F D++DL PYM+PRC +    +YRLLGVVEHLGTMRGGHY+AYVRG  +N 
Sbjct: 808  LCKLSGHVTFRDVLDLGPYMDPRCVDTERYVYRLLGVVEHLGTMRGGHYIAYVRGDERNK 867

Query: 1069 VETEKASSGDYTWYHASDAYVSQVSFEEVLRCEAYIL 1179
             + +K   G   WY+ASDA+V +VS EEVLRC+AY+L
Sbjct: 868  GKADKEQGGS-VWYYASDAHVREVSLEEVLRCDAYLL 903


Top