BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00032002
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containi...   187   9e-46
ref|XP_002514292.1| pentatricopeptide repeat-containing protein,...   156   2e-36
ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
dbj|BAA25906.1| leaf protein [Ipomoea nil]                            153   2e-35
ref|XP_003630793.1| Pentatricopeptide repeat-containing protein ...   145   4e-33

>ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
           [Vitis vinifera] gi|297738818|emb|CBI28063.3| unnamed
           protein product [Vitis vinifera]
          Length = 636

 Score =  187 bits (475), Expect = 9e-46
 Identities = 95/135 (70%), Positives = 106/135 (78%)
 Frame = -1

Query: 408 EPLLQERDQLCRFSASLSSRIQSRCIVCLDNNSCKVVRSRTRLMKILIEKGKPQEAHSIF 229
           E  L E+DQL   S S+ S+IQSRC+VCL NNSC+ VRSRT+LM ILIEKGKPQEA  IF
Sbjct: 35  ESPLHEKDQLQSVSTSMDSQIQSRCLVCLGNNSCRTVRSRTKLMNILIEKGKPQEAQLIF 94

Query: 228 RGLTEEGHRPXXXXXXXXXXXXXVQKRFKSIPSLLSKVEESGLKPDSIFFNAMINAFSES 49
             LTEEGHRP              QKRFKSIPSL+SK+E++GLKPDS+FFNAMINAFSES
Sbjct: 95  NSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSES 154

Query: 48  GNVKEAMKIFRKMKD 4
           GNVKEAMKIFRKMKD
Sbjct: 155 GNVKEAMKIFRKMKD 169


>ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546748|gb|EEF48246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 608

 Score =  156 bits (394), Expect = 2e-36
 Identities = 81/132 (61%), Positives = 94/132 (71%)
 Frame = -1

Query: 399 LQERDQLCRFSASLSSRIQSRCIVCLDNNSCKVVRSRTRLMKILIEKGKPQEAHSIFRGL 220
           L E+DQ    S S+ SR+QSRC VCL  NSC+ V SRT+LM ILI KGKP EA+ IF  L
Sbjct: 25  LSEKDQFQLISPSVDSRVQSRCPVCLGKNSCRTVHSRTKLMNILIGKGKPHEANLIFDNL 84

Query: 219 TEEGHRPXXXXXXXXXXXXXVQKRFKSIPSLLSKVEESGLKPDSIFFNAMINAFSESGNV 40
            E+GHRP               K F+SI  L+SKVEE+G+KPDSI +NAMINAFSESGNV
Sbjct: 85  VEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNV 144

Query: 39  KEAMKIFRKMKD 4
           KEAMKIF+KMKD
Sbjct: 145 KEAMKIFQKMKD 156


>ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
           gi|449518833|ref|XP_004166440.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
          Length = 609

 Score =  154 bits (388), Expect = 1e-35
 Identities = 75/131 (57%), Positives = 98/131 (74%)
 Frame = -1

Query: 393 ERDQLCRFSASLSSRIQSRCIVCLDNNSCKVVRSRTRLMKILIEKGKPQEAHSIFRGLTE 214
           +++Q+   S  + S+IQSRC++CL NNSC  VRSRT+LM IL+E+GKPQEA  IF  L E
Sbjct: 26  QKNQVKLVSTPVDSQIQSRCLLCLGNNSCGTVRSRTKLMNILVERGKPQEAQFIFNSLVE 85

Query: 213 EGHRPXXXXXXXXXXXXXVQKRFKSIPSLLSKVEESGLKPDSIFFNAMINAFSESGNVKE 34
           +GHRP              QKRFK+I  LLS++EE+G+KPDSI  NA+INAFSESGNVKE
Sbjct: 86  QGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKE 145

Query: 33  AMKIFRKMKDN 1
           AM+IF+KM+++
Sbjct: 146 AMEIFQKMEES 156


>dbj|BAA25906.1| leaf protein [Ipomoea nil]
          Length = 665

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/112 (66%), Positives = 86/112 (76%)
 Frame = -1

Query: 339 RCIVCLDNNSCKVVRSRTRLMKILIEKGKPQEAHSIFRGLTEEGHRPXXXXXXXXXXXXX 160
           RC  C  N+ C+ VRSRT+LMK LIE+GKPQE HSI +GLTEEGHRP             
Sbjct: 55  RCTACWGNDGCQTVRSRTKLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALT 114

Query: 159 VQKRFKSIPSLLSKVEESGLKPDSIFFNAMINAFSESGNVKEAMKIFRKMKD 4
           +QKRFKSIP LL KVE++GL+PDSIFFN MINAF ESGNVKEAMKIFRKM++
Sbjct: 115 LQKRFKSIPLLLKKVEQNGLRPDSIFFNPMINAFCESGNVKEAMKIFRKMRE 166


>ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524815|gb|AET05269.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 584

 Score =  145 bits (366), Expect = 4e-33
 Identities = 72/114 (63%), Positives = 85/114 (74%)
 Frame = -1

Query: 345 QSRCIVCLDNNSCKVVRSRTRLMKILIEKGKPQEAHSIFRGLTEEGHRPXXXXXXXXXXX 166
           +SRC++C+ +NSC+ V SRT+LM  LI KGKP EA +IF  LTEEGH+P           
Sbjct: 28  ESRCLICMGSNSCQTVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAA 87

Query: 165 XXVQKRFKSIPSLLSKVEESGLKPDSIFFNAMINAFSESGNVKEAMKIFRKMKD 4
               KRF SIPSLLSKVEE+G+KPDSI FNAMINAFS+SG V EAMKIFRKMK+
Sbjct: 88  LTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKE 141