BLASTX nr result

ID: Cnidium21_contig00031988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031988
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19788.3| unnamed protein product [Vitis vinifera]              209   1e-52
ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis v...   209   1e-52
ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus co...   208   4e-52
ref|NP_176393.1| coatomer subunit alpha-1 [Arabidopsis thaliana]...   206   2e-51
ref|XP_002878550.1| hypothetical protein ARALYDRAFT_900556 [Arab...   204   5e-51

>emb|CBI19788.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  209 bits (533), Expect = 1e-52
 Identities = 100/117 (85%), Positives = 112/117 (95%)
 Frame = +3

Query: 3   YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNFKNEIIKKSP 182
           YELYI+P+DS GRGDT+Q+AKRG+GGSAVFVARNRFAVLEKSSNQVLVKN KNEI+KKS 
Sbjct: 391 YELYIVPRDSIGRGDTVQDAKRGVGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSV 450

Query: 183 LPVPTDAIFYAGTGNLLCRAEDRVVIFDLQQRIILGDLQTSFVRYVVWSNDMESVAL 353
           LPV  DAIFYAGTGNLLCRAEDRVV+FDLQQR++LG+LQTSF+RYVVWSNDME+VAL
Sbjct: 451 LPVAADAIFYAGTGNLLCRAEDRVVVFDLQQRLVLGELQTSFIRYVVWSNDMENVAL 507


>ref|XP_002279779.1| PREDICTED: coatomer subunit alpha-1 [Vitis vinifera]
          Length = 1217

 Score =  209 bits (533), Expect = 1e-52
 Identities = 100/117 (85%), Positives = 112/117 (95%)
 Frame = +3

Query: 3   YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNFKNEIIKKSP 182
           YELYI+P+DS GRGDT+Q+AKRG+GGSAVFVARNRFAVLEKSSNQVLVKN KNEI+KKS 
Sbjct: 391 YELYIVPRDSIGRGDTVQDAKRGVGGSAVFVARNRFAVLEKSSNQVLVKNLKNEIVKKSV 450

Query: 183 LPVPTDAIFYAGTGNLLCRAEDRVVIFDLQQRIILGDLQTSFVRYVVWSNDMESVAL 353
           LPV  DAIFYAGTGNLLCRAEDRVV+FDLQQR++LG+LQTSF+RYVVWSNDME+VAL
Sbjct: 451 LPVAADAIFYAGTGNLLCRAEDRVVVFDLQQRLVLGELQTSFIRYVVWSNDMENVAL 507


>ref|XP_002512969.1| coatomer alpha subunit, putative [Ricinus communis]
           gi|223547980|gb|EEF49472.1| coatomer alpha subunit,
           putative [Ricinus communis]
          Length = 1217

 Score =  208 bits (529), Expect = 4e-52
 Identities = 100/117 (85%), Positives = 109/117 (93%)
 Frame = +3

Query: 3   YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNFKNEIIKKSP 182
           YELY+IPKDS  RGDT+QEAKRG GGSA+FVARNRFAVL+KSSNQVLVKN KNE++KKS 
Sbjct: 391 YELYVIPKDSISRGDTVQEAKRGAGGSAIFVARNRFAVLDKSSNQVLVKNLKNEVVKKSS 450

Query: 183 LPVPTDAIFYAGTGNLLCRAEDRVVIFDLQQRIILGDLQTSFVRYVVWSNDMESVAL 353
           LP+  DAIFYAGTGNLLCRAEDRVVIFDLQQRI+LGDLQT FV+YVVWSNDMESVAL
Sbjct: 451 LPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRIVLGDLQTPFVKYVVWSNDMESVAL 507


>ref|NP_176393.1| coatomer subunit alpha-1 [Arabidopsis thaliana]
           gi|146286088|sp|Q94A40.2|COPA1_ARATH RecName:
           Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat
           protein 1; Short=Alpha-COP 1 gi|3367534|gb|AAC28519.1|
           Strong similarity to coatamer alpha subunit (HEPCOP)
           homolog gb|U24105 from Homo sapiens [Arabidopsis
           thaliana] gi|332195793|gb|AEE33914.1| coatomer subunit
           alpha-1 [Arabidopsis thaliana]
          Length = 1216

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/117 (82%), Positives = 111/117 (94%)
 Frame = +3

Query: 3   YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNFKNEIIKKSP 182
           YELYIIPKDS GR D +Q+AKRG GGSAVF+ARNRFAVLEKS++QVLVKN KNE++KKSP
Sbjct: 391 YELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSP 450

Query: 183 LPVPTDAIFYAGTGNLLCRAEDRVVIFDLQQRIILGDLQTSFVRYVVWSNDMESVAL 353
           LP+PTDAIFYAGTGNLLCR+ED+VVIFDLQQR++LG+LQT FVRYVVWS+DMESVAL
Sbjct: 451 LPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSSDMESVAL 507


>ref|XP_002878550.1| hypothetical protein ARALYDRAFT_900556 [Arabidopsis lyrata subsp.
           lyrata] gi|297324389|gb|EFH54809.1| hypothetical protein
           ARALYDRAFT_900556 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score =  204 bits (520), Expect = 5e-51
 Identities = 97/117 (82%), Positives = 110/117 (94%)
 Frame = +3

Query: 3   YELYIIPKDSFGRGDTIQEAKRGLGGSAVFVARNRFAVLEKSSNQVLVKNFKNEIIKKSP 182
           YELYIIPKDS GR D +Q+AKRG GGSAVF+ARNRFAVLEKS++QVLVKN KNE++KKS 
Sbjct: 367 YELYIIPKDSVGRSDVVQDAKRGTGGSAVFIARNRFAVLEKSTSQVLVKNLKNEVVKKSS 426

Query: 183 LPVPTDAIFYAGTGNLLCRAEDRVVIFDLQQRIILGDLQTSFVRYVVWSNDMESVAL 353
           LP+PTDAIFYAGTGNLLCR+ED+VVIFDLQQR++LG+LQT FVRYVVWSNDMESVAL
Sbjct: 427 LPIPTDAIFYAGTGNLLCRSEDKVVIFDLQQRLVLGELQTPFVRYVVWSNDMESVAL 483


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