BLASTX nr result

ID: Cnidium21_contig00031987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031987
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877729.1| hypothetical protein ARALYDRAFT_485370 [Arab...    50   1e-11
ref|NP_190581.1| uncharacterized protein [Arabidopsis thaliana] ...    50   1e-11
gb|AAU44487.1| hypothetical protein AT3G50120 [Arabidopsis thali...    50   1e-11
gb|ABK28593.1| unknown [Arabidopsis thaliana]                          50   3e-10
ref|NP_190585.2| uncharacterized protein [Arabidopsis thaliana] ...    50   3e-10

>ref|XP_002877729.1| hypothetical protein ARALYDRAFT_485370 [Arabidopsis lyrata subsp.
           lyrata] gi|297323567|gb|EFH53988.1| hypothetical protein
           ARALYDRAFT_485370 [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score = 50.1 bits (118), Expect(2) = 1e-11
 Identities = 23/52 (44%), Positives = 35/52 (67%)
 Frame = -2

Query: 407 GVIENLLGENLQVADLFNNLCKEVIGDQKDFYFASICNNLNIYSKDYIHEWS 252
           G+IE+ LG + +VADLFN LC+EV+ D +D Y + +   +N Y   Y H+W+
Sbjct: 438 GIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLSIEVNRY---YDHKWN 486



 Score = 43.9 bits (102), Expect(2) = 1e-11
 Identities = 16/44 (36%), Positives = 31/44 (70%)
 Frame = -1

Query: 255 ESRWFRWKLLLKN*YFSNPWSIIAFLAACDVLILTAARTVCSTF 124
           + +W  W+  LK+ YF+NPW+I++F AA  +L+LT +++  + +
Sbjct: 482 DHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVY 525


>ref|NP_190581.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6522933|emb|CAB62120.1| putative protein [Arabidopsis
           thaliana] gi|60547801|gb|AAX23864.1| hypothetical
           protein At3g50120 [Arabidopsis thaliana]
           gi|332645107|gb|AEE78628.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 531

 Score = 50.1 bits (118), Expect(2) = 1e-11
 Identities = 23/52 (44%), Positives = 35/52 (67%)
 Frame = -2

Query: 407 GVIENLLGENLQVADLFNNLCKEVIGDQKDFYFASICNNLNIYSKDYIHEWS 252
           G+IE+ LG + +VADLFN LC+EV+ D +D Y + +   +N Y   Y H+W+
Sbjct: 437 GIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLSIEVNRY---YDHKWN 485



 Score = 43.9 bits (102), Expect(2) = 1e-11
 Identities = 16/44 (36%), Positives = 31/44 (70%)
 Frame = -1

Query: 255 ESRWFRWKLLLKN*YFSNPWSIIAFLAACDVLILTAARTVCSTF 124
           + +W  W+  LK+ YF+NPW+I++F AA  +L+LT +++  + +
Sbjct: 481 DHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVY 524


>gb|AAU44487.1| hypothetical protein AT3G50120 [Arabidopsis thaliana]
          Length = 531

 Score = 50.1 bits (118), Expect(2) = 1e-11
 Identities = 23/52 (44%), Positives = 35/52 (67%)
 Frame = -2

Query: 407 GVIENLLGENLQVADLFNNLCKEVIGDQKDFYFASICNNLNIYSKDYIHEWS 252
           G+IE+ LG + +VADLFN LC+EV+ D +D Y + +   +N Y   Y H+W+
Sbjct: 437 GIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLSIEVNRY---YDHKWN 485



 Score = 43.9 bits (102), Expect(2) = 1e-11
 Identities = 16/44 (36%), Positives = 31/44 (70%)
 Frame = -1

Query: 255 ESRWFRWKLLLKN*YFSNPWSIIAFLAACDVLILTAARTVCSTF 124
           + +W  W+  LK+ YF+NPW+I++F AA  +L+LT +++  + +
Sbjct: 481 DHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVY 524


>gb|ABK28593.1| unknown [Arabidopsis thaliana]
          Length = 504

 Score = 50.1 bits (118), Expect(2) = 3e-10
 Identities = 24/53 (45%), Positives = 35/53 (66%)
 Frame = -2

Query: 410 FGVIENLLGENLQVADLFNNLCKEVIGDQKDFYFASICNNLNIYSKDYIHEWS 252
           +G+IEN LG + +V+DLFN L KEVI D  D Y +++   +NIY   Y  +W+
Sbjct: 406 YGIIENWLGSDSEVSDLFNGLGKEVIFDPNDGYLSALTGEVNIY---YRRKWN 455



 Score = 39.3 bits (90), Expect(2) = 3e-10
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = -1

Query: 249 RWFRWKLLLKN*YFSNPWSIIAFLAACDVLILTAARTVCSTFFSLGKY 106
           +W   K  L++ YF+NPW+  +F+AA  +LI     T C +FF++  Y
Sbjct: 453 KWNYLKATLRHKYFNNPWAYFSFIAAVTLLIF----TFCQSFFAVFAY 496


>ref|NP_190585.2| uncharacterized protein [Arabidopsis thaliana]
           gi|71905501|gb|AAZ52728.1| hypothetical protein
           At3g50160 [Arabidopsis thaliana]
           gi|93007370|gb|ABE97188.1| hypothetical protein
           At3g50160 [Arabidopsis thaliana]
           gi|332645112|gb|AEE78633.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 503

 Score = 50.1 bits (118), Expect(2) = 3e-10
 Identities = 24/53 (45%), Positives = 35/53 (66%)
 Frame = -2

Query: 410 FGVIENLLGENLQVADLFNNLCKEVIGDQKDFYFASICNNLNIYSKDYIHEWS 252
           +G+IEN LG + +V+DLFN L KEVI D  D Y +++   +NIY   Y  +W+
Sbjct: 406 YGIIENWLGSDSEVSDLFNGLGKEVIFDPNDGYLSALTGEVNIY---YRRKWN 455



 Score = 39.3 bits (90), Expect(2) = 3e-10
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = -1

Query: 249 RWFRWKLLLKN*YFSNPWSIIAFLAACDVLILTAARTVCSTFFSLGKY 106
           +W   K  L++ YF+NPW+  +F+AA  +LI     T C +FF++  Y
Sbjct: 453 KWNYLKATLRHKYFNNPWAYFSFIAAVTLLIF----TFCQSFFAVFAY 496


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