BLASTX nr result

ID: Cnidium21_contig00031960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031960
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526182.1| AMP dependent ligase, putative [Ricinus comm...   139   2e-31
ref|XP_003538370.1| PREDICTED: medium-chain-fatty-acid--CoA liga...   137   9e-31
ref|XP_003600627.1| 2-succinylbenzoate-CoA ligase [Medicago trun...   136   2e-30
ref|XP_002272437.1| PREDICTED: medium-chain-fatty-acid--CoA liga...   132   2e-29
ref|XP_003552891.1| PREDICTED: medium-chain-fatty-acid--CoA liga...   132   4e-29

>ref|XP_002526182.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223534486|gb|EEF36186.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 286

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/93 (74%), Positives = 80/93 (86%), Gaps = 2/93 (2%)
 Frame = -1

Query: 275 VPMAGAVLNAINTRLDANNIATIIRHSEAKMFFVDYEYVPVARDALRLLIS--ANYSCLP 102
           VPM GA+LN INTRLDA  IATI+RHSEAK+FFVDYEYVP+AR+ALRLL+   ++ +  P
Sbjct: 84  VPMTGAILNTINTRLDAKTIATILRHSEAKVFFVDYEYVPLAREALRLLMDLVSSEASFP 143

Query: 101 LVIVIDDIDSPTGIRLGELEYEQLVRHGNPSYV 3
           LVIVIDDIDSPTGIRLGELEYE L+  GNP+YV
Sbjct: 144 LVIVIDDIDSPTGIRLGELEYEHLIHRGNPNYV 176


>ref|XP_003538370.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
          Length = 620

 Score =  137 bits (345), Expect = 9e-31
 Identities = 73/110 (66%), Positives = 82/110 (74%), Gaps = 19/110 (17%)
 Frame = -1

Query: 275 VPMAGAVLNAINTRLDANNIATIIRHSEAKMFFVDYEYVPVARDALRLLISANYS----- 111
           VPMAGAVLN INTRLDA NIATI+RHSEAK+FFVDYEYV  A+DALRLL+  N +     
Sbjct: 84  VPMAGAVLNTINTRLDAKNIATILRHSEAKVFFVDYEYVSKAKDALRLLMDNNNNNNNKG 143

Query: 110 --------------CLPLVIVIDDIDSPTGIRLGELEYEQLVRHGNPSYV 3
                          LPLVIVIDDI++PTGIRLGELEYEQ+V HGNP+YV
Sbjct: 144 VPKPTTINQQNSTFSLPLVIVIDDINTPTGIRLGELEYEQMVHHGNPNYV 193


>ref|XP_003600627.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
           gi|355489675|gb|AES70878.1| 2-succinylbenzoate-CoA
           ligase [Medicago truncatula]
          Length = 582

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/96 (71%), Positives = 82/96 (85%), Gaps = 5/96 (5%)
 Frame = -1

Query: 275 VPMAGAVLNAINTRLDANNIATIIRHSEAKMFFVDYEYVPVARDALRLLI-----SANYS 111
           VPMAGAVLN IN RL+A NIATI++HSEAK+FFVDYE+V  A+DALRLL+     +  YS
Sbjct: 84  VPMAGAVLNTINHRLNAANIATILQHSEAKVFFVDYEFVSKAKDALRLLMEEKDQTEQYS 143

Query: 110 CLPLVIVIDDIDSPTGIRLGELEYEQLVRHGNPSYV 3
            LPLVIVIDDI++PTGIRLGELEYEQ+V HGNP+Y+
Sbjct: 144 SLPLVIVIDDINNPTGIRLGELEYEQMVHHGNPNYL 179


>ref|XP_002272437.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
          Length = 588

 Score =  132 bits (333), Expect = 2e-29
 Identities = 67/96 (69%), Positives = 80/96 (83%), Gaps = 6/96 (6%)
 Frame = -1

Query: 275 VPMAGAVLNAINTRLDANNIATIIRHSEAKMFFVDYEYVPVARDALRLLISAN------Y 114
           VPM GAVLN IN RLDA+NIATI+ HSEAK+FFVDY+YVP+AR+AL LL++ +       
Sbjct: 84  VPMCGAVLNTINIRLDAHNIATILGHSEAKVFFVDYQYVPLAREALLLLMAQHKEKLVAE 143

Query: 113 SCLPLVIVIDDIDSPTGIRLGELEYEQLVRHGNPSY 6
           S +PLVIVIDDID+PTG+RLGELEYEQLV +GNP Y
Sbjct: 144 SSIPLVIVIDDIDTPTGVRLGELEYEQLVANGNPGY 179


>ref|XP_003552891.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
          Length = 597

 Score =  132 bits (331), Expect = 4e-29
 Identities = 68/91 (74%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = -1

Query: 275 VPMAGAVLNAINTRLDANNIATIIRHSEAKMFFVDYEYVPVARDALRLLI-SANYSCLPL 99
           VPMAGAVLN INTRLDA NIATI+RHSEAK+FFVDYEYV  A++ALRLL+   N + L  
Sbjct: 84  VPMAGAVLNTINTRLDAKNIATILRHSEAKVFFVDYEYVSKAKEALRLLMDDNNNNNLKK 143

Query: 98  VIVIDDIDSPTGIRLGELEYEQLVRHGNPSY 6
           VIVIDDI++PT IRLGELEYEQ+V HGNP+Y
Sbjct: 144 VIVIDDINTPTRIRLGELEYEQMVHHGNPNY 174


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