BLASTX nr result

ID: Cnidium21_contig00031951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031951
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157008.1| PREDICTED: putative RNA polymerase II subuni...   144   6e-33
ref|XP_004152151.1| PREDICTED: putative RNA polymerase II subuni...   144   6e-33
ref|XP_003519102.1| PREDICTED: uncharacterized protein LOC100804...   140   1e-31
ref|XP_002521936.1| conserved hypothetical protein [Ricinus comm...   139   2e-31
ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258...   139   3e-31

>ref|XP_004157008.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Cucumis sativus]
          Length = 632

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/129 (54%), Positives = 97/129 (75%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKHVITERSIAKTCGYPLC 208
           MA    V + DT+Y+LQ  L+E I+ E QL AAGSLMS++D++ V+TERSIA  CGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 207 PNPLSSNHVKSKGKYHISLREHRVYDLEEMRMYCSTKCLVESKAFLGTLQDERSTVLDES 28
            + L S++ + +G+Y ISL+EH+VYDLEE   YCS+ CL+ S+AF G LQDER +V++  
Sbjct: 61  HSNLPSDNTR-RGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPD 119

Query: 27  KIEEIMGLF 1
           K++EI+ LF
Sbjct: 120 KLKEILKLF 128


>ref|XP_004152151.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
           RPAP2 homolog [Cucumis sativus]
          Length = 662

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/129 (54%), Positives = 97/129 (75%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKHVITERSIAKTCGYPLC 208
           MA    V + DT+Y+LQ  L+E I+ E QL AAGSLMS++D++ V+TERSIA  CGYPLC
Sbjct: 1   MAKNQSVLIKDTVYKLQLALYEGIKNENQLFAAGSLMSRSDYEDVVTERSIADLCGYPLC 60

Query: 207 PNPLSSNHVKSKGKYHISLREHRVYDLEEMRMYCSTKCLVESKAFLGTLQDERSTVLDES 28
            + L S++ + +G+Y ISL+EH+VYDLEE   YCS+ CL+ S+AF G LQDER +V++  
Sbjct: 61  HSNLPSDNTR-RGRYRISLKEHKVYDLEETYKYCSSACLINSRAFSGRLQDERCSVMNPD 119

Query: 27  KIEEIMGLF 1
           K++EI+ LF
Sbjct: 120 KLKEILKLF 128


>ref|XP_003519102.1| PREDICTED: uncharacterized protein LOC100804112 [Glycine max]
          Length = 706

 Score =  140 bits (353), Expect = 1e-31
 Identities = 69/129 (53%), Positives = 91/129 (70%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKHVITERSIAKTCGYPLC 208
           MA    VSV D +++LQ  L E IQ E QL AAGSLMS++D++ ++TERSI   CGYPLC
Sbjct: 1   MAKDKPVSVKDAVFKLQMSLLEGIQNEDQLFAAGSLMSRSDYEDIVTERSITNMCGYPLC 60

Query: 207 PNPLSSNHVKSKGKYHISLREHRVYDLEEMRMYCSTKCLVESKAFLGTLQDERSTVLDES 28
            N L S+  + KG+Y ISL+EH+VYDL+E  M+CS+ CLV SK F G+LQ ER + LD  
Sbjct: 61  SNALPSDRPR-KGRYRISLKEHKVYDLQETYMFCSSNCLVSSKTFAGSLQAERCSGLDLE 119

Query: 27  KIEEIMGLF 1
           K+  ++ LF
Sbjct: 120 KLNNVLSLF 128


>ref|XP_002521936.1| conserved hypothetical protein [Ricinus communis]
           gi|223538861|gb|EEF40460.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 645

 Score =  139 bits (351), Expect = 2e-31
 Identities = 71/129 (55%), Positives = 94/129 (72%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKHVITERSIAKTCGYPLC 208
           MA +  VSV DT+Y+LQ  L E I+ E QL AAGSLMS++D++ V+ ERSI+  CGYPLC
Sbjct: 1   MAKEESVSVKDTVYKLQLSLLEGIENEDQLLAAGSLMSRSDYEDVVVERSISNLCGYPLC 60

Query: 207 PNPLSSNHVKSKGKYHISLREHRVYDLEEMRMYCSTKCLVESKAFLGTLQDERSTVLDES 28
            N L S+    KG+Y ISL+EHRVYDL+E  MYCS+ CLV S+AF  +LQ++R +VL+  
Sbjct: 61  NNSLPSDR-PYKGRYRISLKEHRVYDLQETYMYCSSSCLVNSRAFSESLQEKRCSVLNPI 119

Query: 27  KIEEIMGLF 1
           K+ EI+  F
Sbjct: 120 KLNEILRKF 128


>ref|XP_002280625.1| PREDICTED: uncharacterized protein LOC100258021 [Vitis vinifera]
           gi|296089830|emb|CBI39649.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/129 (52%), Positives = 93/129 (72%)
 Frame = -2

Query: 387 MANKALVSVADTIYELQKHLFETIQTETQLHAAGSLMSKNDFKHVITERSIAKTCGYPLC 208
           MA    ++V D +++LQ  L E IQ E QL AAGSLMS++D++ V+TER+IA  CGYPLC
Sbjct: 1   MAGDQPIAVKDAVHKLQLFLLEGIQNENQLFAAGSLMSRSDYEDVVTERTIANLCGYPLC 60

Query: 207 PNPLSSNHVKSKGKYHISLREHRVYDLEEMRMYCSTKCLVESKAFLGTLQDERSTVLDES 28
            N L S  ++ KG Y ISL+EH+VYDL E  MYCS+ C+V S++F G+LQ+ER +VL+  
Sbjct: 61  SNSLPSERLR-KGHYRISLKEHKVYDLHETYMYCSSGCVVNSRSFAGSLQEERCSVLNSE 119

Query: 27  KIEEIMGLF 1
           +I  I+ LF
Sbjct: 120 RINGILRLF 128


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