BLASTX nr result

ID: Cnidium21_contig00031874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031874
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279164.2| PREDICTED: uncharacterized protein LOC100249...   115   3e-31
emb|CBI39535.3| unnamed protein product [Vitis vinifera]              115   3e-31
ref|XP_002318976.1| predicted protein [Populus trichocarpa] gi|2...   117   5e-29
ref|XP_002512464.1| ubiquitin-protein ligase, putative [Ricinus ...   118   5e-29
ref|XP_002330225.1| predicted protein [Populus trichocarpa] gi|2...   118   2e-28

>ref|XP_002279164.2| PREDICTED: uncharacterized protein LOC100249393 [Vitis vinifera]
          Length = 1700

 Score =  115 bits (289), Expect(2) = 3e-31
 Identities = 61/111 (54%), Positives = 78/111 (70%)
 Frame = -3

Query: 418 GRCFPILELSTIVLNCFKDLNNLQTIMIDGAQVSDRVLQTIASNYKSLVDIGFSKCK*VT 239
           G  FP  ELS +     KD+ +L +I +DGA+VSD   Q I++N K LV+IG SKC  VT
Sbjct: 283 GYSFP--ELSKMFFRQLKDMKDLNSIKVDGARVSDFSFQIISANCKCLVEIGLSKCMGVT 340

Query: 238 DFGISQLVLGCFRFRLKILDLTCCDELTNLAILAIVESCRNLMCLKIESCN 86
           D GI QLV GC    LKI++LTCC  +T+ AILA+ +SCRNL+CLK+ESCN
Sbjct: 341 DLGIMQLVSGC--LNLKIVNLTCCCFITDAAILAVADSCRNLLCLKLESCN 389



 Score = 44.3 bits (103), Expect(2) = 3e-31
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -2

Query: 92  LQFVNLLTENSFDCLGSCCFLLKELDVIDC 3
           L+  NL+TE S D LGSCC LL+ELD+ DC
Sbjct: 385 LESCNLITEKSLDQLGSCCLLLEELDLTDC 414


>emb|CBI39535.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  115 bits (289), Expect(2) = 3e-31
 Identities = 61/111 (54%), Positives = 78/111 (70%)
 Frame = -3

Query: 418 GRCFPILELSTIVLNCFKDLNNLQTIMIDGAQVSDRVLQTIASNYKSLVDIGFSKCK*VT 239
           G  FP  ELS +     KD+ +L +I +DGA+VSD   Q I++N K LV+IG SKC  VT
Sbjct: 283 GYSFP--ELSKMFFRQLKDMKDLNSIKVDGARVSDFSFQIISANCKCLVEIGLSKCMGVT 340

Query: 238 DFGISQLVLGCFRFRLKILDLTCCDELTNLAILAIVESCRNLMCLKIESCN 86
           D GI QLV GC    LKI++LTCC  +T+ AILA+ +SCRNL+CLK+ESCN
Sbjct: 341 DLGIMQLVSGC--LNLKIVNLTCCCFITDAAILAVADSCRNLLCLKLESCN 389



 Score = 44.3 bits (103), Expect(2) = 3e-31
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -2

Query: 92  LQFVNLLTENSFDCLGSCCFLLKELDVIDC 3
           L+  NL+TE S D LGSCC LL+ELD+ DC
Sbjct: 385 LESCNLITEKSLDQLGSCCLLLEELDLTDC 414


>ref|XP_002318976.1| predicted protein [Populus trichocarpa] gi|222857352|gb|EEE94899.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  117 bits (293), Expect(2) = 5e-29
 Identities = 58/108 (53%), Positives = 77/108 (71%)
 Frame = -3

Query: 409 FPILELSTIVLNCFKDLNNLQTIMIDGAQVSDRVLQTIASNYKSLVDIGFSKCK*VTDFG 230
           + I E S   + C ++L NL  I+IDGA+VSD V QTI++N +SL++IG SKC  VT+  
Sbjct: 287 YTISEFSANFVECMQELKNLNAIIIDGARVSDTVFQTISNNCRSLIEIGLSKCTGVTNMR 346

Query: 229 ISQLVLGCFRFRLKILDLTCCDELTNLAILAIVESCRNLMCLKIESCN 86
           I QLV GC    LK ++LTCC  +T+ AI AI +SCRNL+CLK+ESCN
Sbjct: 347 IMQLVSGC--VNLKTINLTCCRSITDAAISAIADSCRNLLCLKLESCN 392



 Score = 35.4 bits (80), Expect(2) = 5e-29
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2

Query: 92  LQFVNLLTENSFDCLGSCCFLLKELDVIDC 3
           L+  N++TE S + LGS C LL++LD+ DC
Sbjct: 388 LESCNMITEKSLEQLGSHCALLEDLDLTDC 417


>ref|XP_002512464.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223548425|gb|EEF49916.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 644

 Score =  118 bits (296), Expect(2) = 5e-29
 Identities = 62/106 (58%), Positives = 76/106 (71%)
 Frame = -3

Query: 403 ILELSTIVLNCFKDLNNLQTIMIDGAQVSDRVLQTIASNYKSLVDIGFSKCK*VTDFGIS 224
           + ELS  VL+C KDL NL TI+I+GA+VSD V QTI+S   SL  IG SKC  VT+ GI+
Sbjct: 287 VSELSPTVLHCMKDLKNLTTIIINGARVSDTVFQTISSYCSSLSQIGLSKCIGVTNMGIA 346

Query: 223 QLVLGCFRFRLKILDLTCCDELTNLAILAIVESCRNLMCLKIESCN 86
           QLV G     LK+L LTCC  +T+ AI  I +SCRNL+CLK+ESCN
Sbjct: 347 QLVSG--GLNLKVLSLTCCHSITDAAISTIADSCRNLVCLKLESCN 390



 Score = 34.3 bits (77), Expect(2) = 5e-29
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -2

Query: 92  LQFVNLLTENSFDCLGSCCFLLKELDVIDC 3
           L+  N++TE   + LGS C LL+ELD+ +C
Sbjct: 386 LESCNMITEKGLEQLGSNCLLLEELDLTEC 415


>ref|XP_002330225.1| predicted protein [Populus trichocarpa] gi|222871681|gb|EEF08812.1|
           predicted protein [Populus trichocarpa]
          Length = 646

 Score =  118 bits (295), Expect(2) = 2e-28
 Identities = 61/111 (54%), Positives = 77/111 (69%)
 Frame = -3

Query: 418 GRCFPILELSTIVLNCFKDLNNLQTIMIDGAQVSDRVLQTIASNYKSLVDIGFSKCK*VT 239
           G CF   E+S   + C + L NL TI+IDG + SD + QTI+SN KSL++IG SKC  VT
Sbjct: 286 GHCFS--EVSPSFVKCTQKLKNLNTIIIDGVRGSDTIFQTISSNCKSLIEIGLSKCGGVT 343

Query: 238 DFGISQLVLGCFRFRLKILDLTCCDELTNLAILAIVESCRNLMCLKIESCN 86
           + GI QLV GC    LKI++LTCC  + + AI AI  SCRNL+CLK+ESCN
Sbjct: 344 NMGIIQLVSGC--VNLKIINLTCCRSIADAAISAIANSCRNLLCLKLESCN 392



 Score = 32.3 bits (72), Expect(2) = 2e-28
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = -2

Query: 92  LQFVNLLTENSFDCLGSCCFLLKELDVIDC 3
           L+  N++TE S + LG  C LL+ LD+ DC
Sbjct: 388 LESCNMITEKSLEQLGLHCLLLEVLDLTDC 417


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