BLASTX nr result

ID: Cnidium21_contig00031819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031819
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172256.1| PREDICTED: cyclin-D5-1-like, partial [Cucumi...   161   6e-38
ref|XP_004141404.1| PREDICTED: cyclin-D5-1-like [Cucumis sativus]     161   6e-38
ref|XP_002303399.1| predicted protein [Populus trichocarpa] gi|1...   158   4e-37
gb|AEV41136.1| D5-type cyclin [Populus x canadensis]                  157   1e-36
ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera] gi|3...   155   2e-36

>ref|XP_004172256.1| PREDICTED: cyclin-D5-1-like, partial [Cucumis sativus]
          Length = 242

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/108 (71%), Positives = 92/108 (85%)
 Frame = +2

Query: 17  LKWARLDAIKWTLSTRSIFGFHIRTAYLSLTYFDRFISRRSIDNEKVWAIRLLAVACLSL 196
           +K ARLDAI W L TR++FGF  +TAYLS+ YFDRF+SRR+I NEK+WAIRLLAVACLSL
Sbjct: 57  MKCARLDAIAWILKTRNVFGFGCQTAYLSMIYFDRFLSRRAITNEKLWAIRLLAVACLSL 116

Query: 197 AAKMEERKVPLLTEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPF 340
           A+KMEE KVP L+E+ VD++NFE  +IQRMELLVLN LEWK+G  TPF
Sbjct: 117 ASKMEELKVPALSEFPVDDFNFESKVIQRMELLVLNTLEWKMGSTTPF 164


>ref|XP_004141404.1| PREDICTED: cyclin-D5-1-like [Cucumis sativus]
          Length = 317

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/108 (71%), Positives = 92/108 (85%)
 Frame = +2

Query: 17  LKWARLDAIKWTLSTRSIFGFHIRTAYLSLTYFDRFISRRSIDNEKVWAIRLLAVACLSL 196
           +K ARLDAI W L TR++FGF  +TAYLS+ YFDRF+SRR+I NEK+WAIRLLAVACLSL
Sbjct: 57  MKCARLDAIAWILKTRNVFGFGCQTAYLSMIYFDRFLSRRAITNEKLWAIRLLAVACLSL 116

Query: 197 AAKMEERKVPLLTEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPF 340
           A+KMEE KVP L+E+ VD++NFE  +IQRMELLVLN LEWK+G  TPF
Sbjct: 117 ASKMEELKVPALSEFPVDDFNFESKVIQRMELLVLNTLEWKMGSTTPF 164


>ref|XP_002303399.1| predicted protein [Populus trichocarpa]
           gi|159025723|emb|CAN88862.1| D5-type cyclin [Populus
           trichocarpa] gi|222840831|gb|EEE78378.1| predicted
           protein [Populus trichocarpa]
          Length = 337

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/108 (70%), Positives = 93/108 (86%)
 Frame = +2

Query: 17  LKWARLDAIKWTLSTRSIFGFHIRTAYLSLTYFDRFISRRSIDNEKVWAIRLLAVACLSL 196
           LK+ARLDAI+W L+TR+I+GF   TAYLS+TYFDRF+S+RSID  K+WAIRLL+VACLSL
Sbjct: 81  LKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDEGKLWAIRLLSVACLSL 140

Query: 197 AAKMEERKVPLLTEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPF 340
           AAKMEERKVP L+E+ V++Y F   +IQRMELLVLN LEW++  ITPF
Sbjct: 141 AAKMEERKVPPLSEFPVEDYCFGNKVIQRMELLVLNTLEWRMNSITPF 188


>gb|AEV41136.1| D5-type cyclin [Populus x canadensis]
          Length = 337

 Score =  157 bits (396), Expect = 1e-36
 Identities = 75/108 (69%), Positives = 92/108 (85%)
 Frame = +2

Query: 17  LKWARLDAIKWTLSTRSIFGFHIRTAYLSLTYFDRFISRRSIDNEKVWAIRLLAVACLSL 196
           LK+ARLDAI+W L+TR+I+GF   TAYLS+TYFDRF+S+RSID  K+WAIRLL+VACLSL
Sbjct: 81  LKFARLDAIEWILNTRAIYGFRFHTAYLSVTYFDRFVSKRSIDEGKLWAIRLLSVACLSL 140

Query: 197 AAKMEERKVPLLTEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPF 340
           AAKMEERKVP L+E+ V++Y F   +IQRME LVLN LEW++  ITPF
Sbjct: 141 AAKMEERKVPPLSEFPVEDYCFGNKVIQRMEFLVLNTLEWRMNSITPF 188


>ref|XP_002283315.1| PREDICTED: cyclin-D5-1 [Vitis vinifera]
           gi|302142205|emb|CBI19408.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/112 (66%), Positives = 91/112 (81%), Gaps = 3/112 (2%)
 Frame = +2

Query: 14  ILKW---ARLDAIKWTLSTRSIFGFHIRTAYLSLTYFDRFISRRSIDNEKVWAIRLLAVA 184
           IL W   ARLDA+ W L TR++FGF  +TAYL + Y DRF+SRR+ID++K WAIRLL+VA
Sbjct: 59  ILNWVKLARLDAVAWILRTRAVFGFRFQTAYLCVAYLDRFLSRRAIDSDKTWAIRLLSVA 118

Query: 185 CLSLAAKMEERKVPLLTEYYVDEYNFEGSMIQRMELLVLNALEWKLGLITPF 340
           CLSLAAKMEE + P L+E+ V+EYNFE  +IQRMELLVLN LEW++G ITPF
Sbjct: 119 CLSLAAKMEECRAPALSEFAVEEYNFESKVIQRMELLVLNTLEWRMGSITPF 170


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