BLASTX nr result

ID: Cnidium21_contig00031780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031780
         (1232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifer...   169   1e-39
ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|2...   167   4e-39
gb|ADI39635.1| plastid CUL1 [Hevea brasiliensis]                      167   5e-39
ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223...   167   7e-39
ref|XP_002266031.1| PREDICTED: cullin-1 [Vitis vinifera] gi|2960...   166   1e-38

>ref|XP_002272195.1| PREDICTED: cullin-1 isoform 1 [Vitis vinifera]
           gi|297736859|emb|CBI26060.3| unnamed protein product
           [Vitis vinifera]
          Length = 744

 Score =  169 bits (429), Expect = 1e-39
 Identities = 102/247 (41%), Positives = 146/247 (59%), Gaps = 5/247 (2%)
 Frame = +3

Query: 3   KARMILDGYQPGQLFTSEDYIKYYDCIYYMSVQRDPYSYSPQLREMFRRALEESIAMRVM 182
           K + IL+G  P   F+SEDY+  Y  IY M  Q+ P+ YS QL + +R + EE I   V+
Sbjct: 24  KLKNILEGL-PEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITTTVL 82

Query: 183 PSLSDKTDSSLLVELTNMWARYKKMANCLGGIFQYLER----GRTGDSLIQTSARCFHDL 350
           PSL +K D  +L EL   W+ +K M   L   F YL+R     R+  +L +    CF DL
Sbjct: 83  PSLREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFIARRSLPALNEVGLTCFRDL 142

Query: 351 VCFEHYQKFQAAAISLNHKDRDEETPLNRDLLQNVSTFFVDMGLGK-KFYYNNFEKAVLA 527
           V  E Y K + A ISL  ++R+ E  ++R LL+NV   FV++G+G+ + Y N+FE A+L 
Sbjct: 143 VYQELYSKVRDAVISLIDQEREGE-QIDRALLKNVLDIFVEIGMGQMEQYENDFEAAMLK 201

Query: 528 DAASYYSQLASQWRVCYSFTVYVQKTALCLTKEKARVSQFLYQDSVEKLLQVAQSHMLNQ 707
           D A+YYS+ AS W +  S   Y+ K   CL +EK RVS +L+  S  KLL+  Q+ +L+ 
Sbjct: 202 DTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQNELLSV 261

Query: 708 VSNQLLE 728
            +NQLLE
Sbjct: 262 FANQLLE 268


>ref|XP_002330364.1| predicted protein [Populus trichocarpa] gi|222871568|gb|EEF08699.1|
           predicted protein [Populus trichocarpa]
          Length = 744

 Score =  167 bits (424), Expect = 4e-39
 Identities = 103/247 (41%), Positives = 143/247 (57%), Gaps = 5/247 (2%)
 Frame = +3

Query: 3   KARMILDGYQPGQLFTSEDYIKYYDCIYYMSVQRDPYSYSPQLREMFRRALEESIAMRVM 182
           K + IL+G Q  Q F+SEDY+  Y  IY M  Q+ P+ YS QL + +R + EE I   V+
Sbjct: 24  KLKNILEGLQEPQ-FSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSTVL 82

Query: 183 PSLSDKTDSSLLVELTNMWARYKKMANCLGGIFQYLER----GRTGDSLIQTSARCFHDL 350
           PSL +K D  +L EL   WA +K M   L   F YL+R     R+   L +    CF DL
Sbjct: 83  PSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDL 142

Query: 351 VCFEHYQKFQAAAISLNHKDRDEETPLNRDLLQNVSTFFVDMGLGKKFYY-NNFEKAVLA 527
           V  E   K + A ISL  ++R+ E  ++R LL+NV   FV++G+G+  YY N+FE A+L 
Sbjct: 143 VYQELNGKVRDAVISLIDQEREGE-QIDRALLKNVLDIFVEIGMGQMDYYENDFEAAMLK 201

Query: 528 DAASYYSQLASQWRVCYSFTVYVQKTALCLTKEKARVSQFLYQDSVEKLLQVAQSHMLNQ 707
           D A+YYS+ AS W +  S   Y+ K   CL +EK RVS +L+  S  KLL+  Q  +L+ 
Sbjct: 202 DTAAYYSRKASNWILDDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSV 261

Query: 708 VSNQLLE 728
            + QLLE
Sbjct: 262 YATQLLE 268


>gb|ADI39635.1| plastid CUL1 [Hevea brasiliensis]
          Length = 708

 Score =  167 bits (423), Expect = 5e-39
 Identities = 102/247 (41%), Positives = 144/247 (58%), Gaps = 5/247 (2%)
 Frame = +3

Query: 3   KARMILDGYQPGQLFTSEDYIKYYDCIYYMSVQRDPYSYSPQLREMFRRALEESIAMRVM 182
           K + IL+G  P   F+SEDY+  Y  IY M  Q+ P+ YS QL   +R + EE I   V+
Sbjct: 24  KLKNILEGL-PEPKFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYNKYRESFEEYITSMVL 82

Query: 183 PSLSDKTDSSLLVELTNMWARYKKMANCLGGIFQYLER----GRTGDSLIQTSARCFHDL 350
           PSL +K D  +L EL   WA +K M   L  IF YL+R     ++  +L +    CF DL
Sbjct: 83  PSLREKHDEFMLRELVKRWANHKVMVKWLSCIFHYLDRYFIARKSLPTLNEVGLTCFRDL 142

Query: 351 VCFEHYQKFQAAAISLNHKDRDEETPLNRDLLQNVSTFFVDMGLGKKFYY-NNFEKAVLA 527
           V  E   K + A ISL  ++R+ E  ++R LL+NV   F+++G+G+  YY N+FE A+L 
Sbjct: 143 VYQELNGKVRDAVISLIDQEREGE-QIDRALLKNVLDIFIEIGMGQMDYYENDFEAAMLK 201

Query: 528 DAASYYSQLASQWRVCYSFTVYVQKTALCLTKEKARVSQFLYQDSVEKLLQVAQSHMLNQ 707
           D A+YYS+ AS W +  S   Y+ K   CL +EK RVS +L+  S  KLL+  Q  +L+ 
Sbjct: 202 DTAAYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQHELLSV 261

Query: 708 VSNQLLE 728
            +NQLLE
Sbjct: 262 YANQLLE 268


>ref|XP_002516899.1| Cullin-1, putative [Ricinus communis] gi|223543987|gb|EEF45513.1|
           Cullin-1, putative [Ricinus communis]
          Length = 744

 Score =  167 bits (422), Expect = 7e-39
 Identities = 103/247 (41%), Positives = 142/247 (57%), Gaps = 5/247 (2%)
 Frame = +3

Query: 3   KARMILDGYQPGQLFTSEDYIKYYDCIYYMSVQRDPYSYSPQLREMFRRALEESIAMRVM 182
           K + IL+G  P   F+SEDY+  Y  IY M  Q+ P+ YS QL + +R + EE I   V+
Sbjct: 24  KLKNILEGL-PEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSTVL 82

Query: 183 PSLSDKTDSSLLVELTNMWARYKKMANCLGGIFQYLER----GRTGDSLIQTSARCFHDL 350
           PSL +K D  +L EL   WA +K M   L   F YL+R     R+   L +    CF DL
Sbjct: 83  PSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDRYFIARRSLPPLNEVGLTCFRDL 142

Query: 351 VCFEHYQKFQAAAISLNHKDRDEETPLNRDLLQNVSTFFVDMGLGKKFYY-NNFEKAVLA 527
           V  E   K + A ISL  ++R+ E  ++R LL+NV   FV++G+G+  YY N+FE A+L 
Sbjct: 143 VYQELNAKVRDAVISLIDQEREGE-QIDRALLKNVLDIFVEIGMGQMDYYENDFEVAMLK 201

Query: 528 DAASYYSQLASQWRVCYSFTVYVQKTALCLTKEKARVSQFLYQDSVEKLLQVAQSHMLNQ 707
           D  SYYS+ AS W +  S   Y+ K   CL +EK RVS +L+  S  KLL+  Q  +L+ 
Sbjct: 202 DTGSYYSRKASNWILEDSCPDYMLKAEECLKREKDRVSHYLHSSSEPKLLEKVQYELLSV 261

Query: 708 VSNQLLE 728
            +NQLLE
Sbjct: 262 FANQLLE 268


>ref|XP_002266031.1| PREDICTED: cullin-1 [Vitis vinifera] gi|296086608|emb|CBI32243.3|
           unnamed protein product [Vitis vinifera]
          Length = 741

 Score =  166 bits (419), Expect = 1e-38
 Identities = 101/251 (40%), Positives = 148/251 (58%), Gaps = 5/251 (1%)
 Frame = +3

Query: 3   KARMILDGYQPGQLFTSEDYIKYYDCIYYMSVQRDPYSYSPQLREMFRRALEESIAMRVM 182
           K + IL+G  P   F+SEDY+  Y  IY M  Q+ P+ YS QL E +R A EE I + V+
Sbjct: 24  KLKKILEGL-PEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYEKYREAFEEYITVTVL 82

Query: 183 PSLSDKTDSSLLVELTNMWARYKKMANCLGGIFQYLER----GRTGDSLIQTSARCFHDL 350
           PSL DK D  +L EL   WA +K M   L   F YL+R     R+  +L +    CF +L
Sbjct: 83  PSLRDKHDEFMLRELVKRWANHKVMVKWLSRFFYYLDRYFIARRSLPALNEVGLACFREL 142

Query: 351 VCFEHYQKFQAAAISLNHKDRDEETPLNRDLLQNVSTFFVDMGLGKKFYY-NNFEKAVLA 527
           V  E + + + A ISL  ++R+ E  ++R LL+NV   FV++G+GK  YY ++FE  +L 
Sbjct: 143 VYQEVHGRVKDAVISLIDQEREGE-QIDRALLKNVLDIFVEIGMGKMDYYADDFEADMLN 201

Query: 528 DAASYYSQLASQWRVCYSFTVYVQKTALCLTKEKARVSQFLYQDSVEKLLQVAQSHMLNQ 707
           D A+YYS+ AS W +  S   Y+ K   CL +E+ RVS +L+  S  KL++  Q+ +L  
Sbjct: 202 DTAAYYSRKASNWVLKDSCPDYMLKAEECLKRERDRVSHYLHISSEPKLVEKVQTELLVV 261

Query: 708 VSNQLLEMKKA 740
            +NQLLE +++
Sbjct: 262 YANQLLEKEQS 272


Top