BLASTX nr result

ID: Cnidium21_contig00031734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031734
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609722.1| WD repeat-containing protein [Medicago trunc...   102   4e-20
ref|XP_003609723.1| WD repeat-containing protein [Medicago trunc...   100   2e-19
ref|NP_188306.2| Topless-related 2 protein [Arabidopsis thaliana...    99   3e-19
dbj|BAA95777.1| unnamed protein product [Arabidopsis thaliana]         99   3e-19
gb|EAY73338.1| hypothetical protein OsI_01216 [Oryza sativa Indi...    99   3e-19

>ref|XP_003609722.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510777|gb|AES91919.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score =  102 bits (253), Expect = 4e-20
 Identities = 59/146 (40%), Positives = 86/146 (58%), Gaps = 16/146 (10%)
 Frame = -3

Query: 440 ERKVKRTFQGLNECS-GQLHFDLNKNCILAAGYNHQIRFWDIDNGSLLGVSIADGNLPDV 264
           E  +KRT+ G  + S G + FD  KN ILAAG ++QI+FWD+DN ++L  + A+G LP +
Sbjct: 443 EGALKRTYSGFRKKSNGVVQFDTTKNRILAAGEDNQIKFWDMDNINVLTSTDAEGGLPSL 502

Query: 263 PLIKFNKDGNLLAVTTKNNSIKILASRDGMQLL-------------QTRTQLPASEIAAS 123
           P ++FNK+GNLLAVTT +  +KILA  DGM+ L             Q  T++P S + A+
Sbjct: 503 PRLRFNKEGNLLAVTTADGGVKILADTDGMKYLRSIEARSYEASKAQVETKVPGSSMVAN 562

Query: 122 SKRSIQQI--CNEISPQLFPAKRGHD 51
             + I ++   +  SP   P   G D
Sbjct: 563 MNQHITKVERVDRSSPAPLPIHNGVD 588


>ref|XP_003609723.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510778|gb|AES91920.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 585

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 54/128 (42%), Positives = 80/128 (62%), Gaps = 14/128 (10%)
 Frame = -3

Query: 440 ERKVKRTFQGLNECS-GQLHFDLNKNCILAAGYNHQIRFWDIDNGSLLGVSIADGNLPDV 264
           E  +KRT+ G  + S G + FD  KN ILAAG ++QI+FWD+DN ++L  + A+G LP +
Sbjct: 443 EGALKRTYSGFRKKSNGVVQFDTTKNRILAAGEDNQIKFWDMDNINVLTSTDAEGGLPSL 502

Query: 263 PLIKFNKDGNLLAVTTKNNSIKILASRDGMQLL-------------QTRTQLPASEIAAS 123
           P ++FNK+GNLLAVTT +  +KILA  DGM+ L             Q  T++P S + A+
Sbjct: 503 PRLRFNKEGNLLAVTTADGGVKILADTDGMKYLRSIEARSYEASKAQVETKVPGSSMVAN 562

Query: 122 SKRSIQQI 99
             + I ++
Sbjct: 563 MNQHITKV 570


>ref|NP_188306.2| Topless-related 2 protein [Arabidopsis thaliana]
           gi|302393776|sp|Q9LRZ0.2|TPR2_ARATH RecName:
           Full=Topless-related protein 2
           gi|332642350|gb|AEE75871.1| Topless-related 2 protein
           [Arabidopsis thaliana]
          Length = 1131

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/125 (43%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
 Frame = -3

Query: 440 ERKVKRTFQGLNECS-GQLHFDLNKNCILAAGYNHQIRFWDIDNGSLLGVSIADGNLPDV 264
           E  +KRT+ G  + S G + FD  +N  LA G ++QI+FW++DN +LL V  A+G LP++
Sbjct: 575 EGALKRTYLGFRKKSAGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNL 634

Query: 263 PLIKFNKDGNLLAVTTKNNSIKILASRDGMQLLQT--RTQLPASEIAASSKRSIQQICNE 90
           P ++FNKDGNLLAVTT +N  KILA+ DG++ L+        AS+ +   K S   + + 
Sbjct: 635 PRLRFNKDGNLLAVTTADNGFKILANTDGLRTLRAFEARSFEASKASIDMKVSTSAMASS 694

Query: 89  ISPQL 75
           ISP +
Sbjct: 695 ISPAI 699


>dbj|BAA95777.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 54/125 (43%), Positives = 80/125 (64%), Gaps = 3/125 (2%)
 Frame = -3

Query: 440 ERKVKRTFQGLNECS-GQLHFDLNKNCILAAGYNHQIRFWDIDNGSLLGVSIADGNLPDV 264
           E  +KRT+ G  + S G + FD  +N  LA G ++QI+FW++DN +LL V  A+G LP++
Sbjct: 575 EGALKRTYLGFRKKSAGVVQFDTTRNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNL 634

Query: 263 PLIKFNKDGNLLAVTTKNNSIKILASRDGMQLLQT--RTQLPASEIAASSKRSIQQICNE 90
           P ++FNKDGNLLAVTT +N  KILA+ DG++ L+        AS+ +   K S   + + 
Sbjct: 635 PRLRFNKDGNLLAVTTADNGFKILANTDGLRTLRAFEARSFEASKASIDMKVSTSAMASS 694

Query: 89  ISPQL 75
           ISP +
Sbjct: 695 ISPAI 699


>gb|EAY73338.1| hypothetical protein OsI_01216 [Oryza sativa Indica Group]
          Length = 1118

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 8/130 (6%)
 Frame = -3

Query: 440 ERKVKRTFQGLNECS---GQLHFDLNKNCILAAGYNHQIRFWDIDNGSLLGVSIADGNLP 270
           E  +KRT+ G  + S   G + FD  +N ILAAG ++QI+FWD+DN ++L  + ADG LP
Sbjct: 556 EGSIKRTYSGFRKKSAGVGVVQFDTAQNHILAAGEDNQIKFWDVDNTTMLSSTEADGGLP 615

Query: 269 DVPLIKFNKDGNLLAVTTKNNSIKILASRDGMQLLQTRTQLPASEI-----AASSKRSIQ 105
            +P ++FNK+GNLLAVTT +N  KILA+ DG++ L+     P         A+S K S  
Sbjct: 616 GLPRLRFNKEGNLLAVTTVDNGFKILANADGLRTLRAFGNRPFEAFRSQYEASSMKVSGA 675

Query: 104 QICNEISPQL 75
            +   ISP +
Sbjct: 676 PVVAGISPNI 685


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