BLASTX nr result

ID: Cnidium21_contig00031719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031719
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   180   1e-43
emb|CBI40380.3| unnamed protein product [Vitis vinifera]              180   1e-43
ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...   176   1e-42
ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II tra...   171   7e-41
ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II tra...   171   7e-41

>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/120 (71%), Positives = 107/120 (89%)
 Frame = -1

Query: 418 GRSAKDSSRSEASPVTSNFPLNSRRQIQVTPYKLRCEKESLNSRLGPPDFNPPTLNCPEE 239
           G SA+DS+R+++S +++NF LNSRRQ Q+TPYKL+C+KESLNSRLGPPDF+P T  CPEE
Sbjct: 20  GPSARDSARADSSSLSANFSLNSRRQSQLTPYKLKCDKESLNSRLGPPDFHPQTSTCPEE 79

Query: 238 TLTKEYVQSGYRETVEGLEESREISLSQAQAFSRPLVLKCKESIRKYHRAINEARARKRK 59
           TLT+EYVQ GYRETV GLE++REI+L+Q QAFS+P VLKCKE+IRK  RAINE+RA+KRK
Sbjct: 80  TLTQEYVQHGYRETVVGLEDAREIALTQIQAFSKPTVLKCKEAIRKRLRAINESRAQKRK 139


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/120 (71%), Positives = 107/120 (89%)
 Frame = -1

Query: 418 GRSAKDSSRSEASPVTSNFPLNSRRQIQVTPYKLRCEKESLNSRLGPPDFNPPTLNCPEE 239
           G SA+DS+R+++S +++NF LNSRRQ Q+TPYKL+C+KESLNSRLGPPDF+P T  CPEE
Sbjct: 20  GPSARDSARADSSSLSANFSLNSRRQSQLTPYKLKCDKESLNSRLGPPDFHPQTSTCPEE 79

Query: 238 TLTKEYVQSGYRETVEGLEESREISLSQAQAFSRPLVLKCKESIRKYHRAINEARARKRK 59
           TLT+EYVQ GYRETV GLE++REI+L+Q QAFS+P VLKCKE+IRK  RAINE+RA+KRK
Sbjct: 80  TLTQEYVQHGYRETVVGLEDAREIALTQIQAFSKPTVLKCKEAIRKRLRAINESRAQKRK 139


>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
           putative [Ricinus communis]
          Length = 2264

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/121 (71%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
 Frame = -1

Query: 418 GRSAKDSSRSEASPVTSNFPLNSRRQIQVTPYKLRCEKESLNSRLGPPDFNPPTLNCPEE 239
           G S +D+ R++ S + +NFP+NSRR   +TPYKL+C+KE LNSRLGPPDF+P T NCPEE
Sbjct: 20  GASVRDTVRADPSSLAANFPINSRRPPPLTPYKLKCDKEPLNSRLGPPDFHPQTPNCPEE 79

Query: 238 TLTKEYVQSGYRETVEGLEESREISLSQAQAF-SRPLVLKCKESIRKYHRAINEARARKR 62
           TLT+EYVQSGYRETVEGLEE+REISLSQ QAF S+P+VLKC+E+IRK  RAINE+RA+KR
Sbjct: 80  TLTREYVQSGYRETVEGLEEAREISLSQVQAFSSKPVVLKCREAIRKCLRAINESRAQKR 139

Query: 61  K 59
           K
Sbjct: 140 K 140


>ref|XP_004155825.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Cucumis sativus]
          Length = 2254

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/120 (68%), Positives = 102/120 (85%)
 Frame = -1

Query: 418 GRSAKDSSRSEASPVTSNFPLNSRRQIQVTPYKLRCEKESLNSRLGPPDFNPPTLNCPEE 239
           G SA+D+ R+++S +  NFPLNSRR   +T YKL+CEKESLN+RLGPPDF+P T +CPEE
Sbjct: 20  GPSARDTVRADSSSLPGNFPLNSRRPAPLTAYKLKCEKESLNNRLGPPDFHPQTSSCPEE 79

Query: 238 TLTKEYVQSGYRETVEGLEESREISLSQAQAFSRPLVLKCKESIRKYHRAINEARARKRK 59
            LT+EYVQSGYRETVEGLEESREI L+Q QAFS+ LV+KCK++ RK  RAIN++RA+KRK
Sbjct: 80  NLTREYVQSGYRETVEGLEESREILLTQVQAFSKHLVIKCKDATRKRLRAINDSRAQKRK 139


>ref|XP_004133865.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           12-like [Cucumis sativus]
          Length = 2254

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/120 (68%), Positives = 102/120 (85%)
 Frame = -1

Query: 418 GRSAKDSSRSEASPVTSNFPLNSRRQIQVTPYKLRCEKESLNSRLGPPDFNPPTLNCPEE 239
           G SA+D+ R+++S +  NFPLNSRR   +T YKL+CEKESLN+RLGPPDF+P T +CPEE
Sbjct: 20  GPSARDTVRADSSSLPGNFPLNSRRPAPLTAYKLKCEKESLNNRLGPPDFHPQTSSCPEE 79

Query: 238 TLTKEYVQSGYRETVEGLEESREISLSQAQAFSRPLVLKCKESIRKYHRAINEARARKRK 59
            LT+EYVQSGYRETVEGLEESREI L+Q QAFS+ LV+KCK++ RK  RAIN++RA+KRK
Sbjct: 80  NLTREYVQSGYRETVEGLEESREILLTQVQAFSKHLVIKCKDATRKRLRAINDSRAQKRK 139


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