BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031666
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   340   1e-91
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   334   7e-90
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab...   330   1e-88
ref|NP_200908.1| Replication factor-A protein 1-like protein [Ar...   328   4e-88
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   328   4e-88

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  340 bits (872), Expect = 1e-91
 Identities = 167/199 (83%), Positives = 187/199 (93%)
 Frame = +1

Query: 22  SRGEGCVFNVELTDEDGTQIQATMFNESAKKFYDRFQLGKAYYISKGTLRVANKQFKTVQ 201
           +RGEGCVFNVELTDEDGTQIQATMFNE+A+KFYD+FQLGK YYISKG+L+VANKQF+TVQ
Sbjct: 207 ARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDKFQLGKVYYISKGSLKVANKQFRTVQ 266

Query: 202 NDYEMTLNENSIVEEAIEEGTFIPETKFNFVPIDQLGPYVNNSELVDVIGVVQSVSPTMS 381
           NDYEM LNENS VEEA +E  FIPETKFNFVPIDQLGPYV+ +ELVDVIGVVQSVSPTMS
Sbjct: 267 NDYEMNLNENSQVEEASDEAAFIPETKFNFVPIDQLGPYVSTNELVDVIGVVQSVSPTMS 326

Query: 382 IRRKSNNETIPKRDITIADESKKTVVVSLWNDLATTVGQELLDIADQSPVVAMKSLKVGD 561
           IRRKSNN+ +PKRDITIADE+KKTVVVSLWNDLAT VGQELLD+AD+SPVVA+K+LKVGD
Sbjct: 327 IRRKSNNDIVPKRDITIADETKKTVVVSLWNDLATDVGQELLDMADKSPVVAIKALKVGD 386

Query: 562 FQGVSLSALSRTVIVVNPE 618
           FQGVSLS L R++I VNP+
Sbjct: 387 FQGVSLSTLGRSIIQVNPD 405


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  334 bits (857), Expect = 7e-90
 Identities = 164/198 (82%), Positives = 183/198 (92%)
 Frame = +1

Query: 22  SRGEGCVFNVELTDEDGTQIQATMFNESAKKFYDRFQLGKAYYISKGTLRVANKQFKTVQ 201
           +RGEGCVFNVELTD DGTQIQATMFNE+AKKFYDRF+LGK YYISKGTLRVANKQFKTVQ
Sbjct: 188 ARGEGCVFNVELTDGDGTQIQATMFNEAAKKFYDRFELGKVYYISKGTLRVANKQFKTVQ 247

Query: 202 NDYEMTLNENSIVEEAIEEGTFIPETKFNFVPIDQLGPYVNNSELVDVIGVVQSVSPTMS 381
           NDYEMTLNENS VEEA +E   IPETKF FVPIDQLGPYVN+ +LVDVIG+VQSVSPT S
Sbjct: 248 NDYEMTLNENSEVEEASDEAACIPETKFKFVPIDQLGPYVNSKDLVDVIGIVQSVSPTTS 307

Query: 382 IRRKSNNETIPKRDITIADESKKTVVVSLWNDLATTVGQELLDIADQSPVVAMKSLKVGD 561
           IRRKSNNET+PKRDI +ADE+KKTVVVSLWN+LAT+VGQEL DIAD+SPVVA+KSLKVGD
Sbjct: 308 IRRKSNNETVPKRDIVVADETKKTVVVSLWNELATSVGQELHDIADKSPVVAIKSLKVGD 367

Query: 562 FQGVSLSALSRTVIVVNP 615
           FQG+SLS L ++++ VNP
Sbjct: 368 FQGISLSTLGKSIVQVNP 385


>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
           lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
           ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score =  330 bits (846), Expect = 1e-88
 Identities = 161/199 (80%), Positives = 186/199 (93%)
 Frame = +1

Query: 22  SRGEGCVFNVELTDEDGTQIQATMFNESAKKFYDRFQLGKAYYISKGTLRVANKQFKTVQ 201
           +RGEGCVFNVELTDE+GTQIQATMFN++A+KFYDRFQLGK YYIS+G+L++ANKQFKTVQ
Sbjct: 214 ARGEGCVFNVELTDEEGTQIQATMFNDAARKFYDRFQLGKVYYISRGSLKLANKQFKTVQ 273

Query: 202 NDYEMTLNENSIVEEAIEEGTFIPETKFNFVPIDQLGPYVNNSELVDVIGVVQSVSPTMS 381
           NDYEMTLNENS VEEA  E  FIPETKFNFVPI++LG YVN  EL+D+IGVVQSVSPTMS
Sbjct: 274 NDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMS 333

Query: 382 IRRKSNNETIPKRDITIADESKKTVVVSLWNDLATTVGQELLDIADQSPVVAMKSLKVGD 561
           IRR+++NE IPKRDIT+ADESKKTVVVSLWNDLAT +GQELLD+AD+SPVVA+KSLKVGD
Sbjct: 334 IRRRTDNEMIPKRDITLADESKKTVVVSLWNDLATGIGQELLDMADKSPVVAIKSLKVGD 393

Query: 562 FQGVSLSALSRTVIVVNPE 618
           FQGVSLS +SR+ +V+NPE
Sbjct: 394 FQGVSLSTISRSNVVINPE 412


>ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
           gi|10177323|dbj|BAB10649.1| replication protein A1
           [Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
           putative RNA helicase [Arabidopsis thaliana]
           gi|332010026|gb|AED97409.1| Replication factor-A protein
           1-like protein [Arabidopsis thaliana]
          Length = 629

 Score =  328 bits (842), Expect = 4e-88
 Identities = 159/199 (79%), Positives = 186/199 (93%)
 Frame = +1

Query: 22  SRGEGCVFNVELTDEDGTQIQATMFNESAKKFYDRFQLGKAYYISKGTLRVANKQFKTVQ 201
           +RGEGCVFNVELTDE+GTQIQATMFN++A+KF+DRFQLGK YYIS+G+L++ANKQFKTVQ
Sbjct: 212 ARGEGCVFNVELTDEEGTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQ 271

Query: 202 NDYEMTLNENSIVEEAIEEGTFIPETKFNFVPIDQLGPYVNNSELVDVIGVVQSVSPTMS 381
           NDYEMTLNENS VEEA  E  FIPETKFNFVPI++LG YVN  EL+D+IGVVQSVSPTMS
Sbjct: 272 NDYEMTLNENSEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMS 331

Query: 382 IRRKSNNETIPKRDITIADESKKTVVVSLWNDLATTVGQELLDIADQSPVVAMKSLKVGD 561
           IRR+++NE IPKRDIT+ADES+KTVVVSLWNDLAT +GQELLD+ADQSPV+A+KSLKVGD
Sbjct: 332 IRRRTDNEMIPKRDITLADESRKTVVVSLWNDLATGIGQELLDMADQSPVIAIKSLKVGD 391

Query: 562 FQGVSLSALSRTVIVVNPE 618
           FQGVSLS +SR+ +V+NPE
Sbjct: 392 FQGVSLSTISRSNVVINPE 410


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  328 bits (842), Expect = 4e-88
 Identities = 160/199 (80%), Positives = 185/199 (92%)
 Frame = +1

Query: 22  SRGEGCVFNVELTDEDGTQIQATMFNESAKKFYDRFQLGKAYYISKGTLRVANKQFKTVQ 201
           +RGEGCVFNVEL D+DGT+IQATMFN++A+KFYD+F+LGK YYISKGTLRVANKQFKTVQ
Sbjct: 188 ARGEGCVFNVELADQDGTEIQATMFNQAARKFYDKFELGKVYYISKGTLRVANKQFKTVQ 247

Query: 202 NDYEMTLNENSIVEEAIEEGTFIPETKFNFVPIDQLGPYVNNSELVDVIGVVQSVSPTMS 381
           NDYEMTLNENS VEEAI E  F+PETKFNFV ID+LG YVN  ELVDVIGVVQ+VS TMS
Sbjct: 248 NDYEMTLNENSEVEEAINEAAFVPETKFNFVAIDELGSYVNGRELVDVIGVVQNVSSTMS 307

Query: 382 IRRKSNNETIPKRDITIADESKKTVVVSLWNDLATTVGQELLDIADQSPVVAMKSLKVGD 561
           IRRKSNNE IPKRDITIADE+KKTVVVSLW+DLAT VGQELLD+AD+SPVVA++S+KVGD
Sbjct: 308 IRRKSNNEMIPKRDITIADETKKTVVVSLWSDLATNVGQELLDMADKSPVVAIRSVKVGD 367

Query: 562 FQGVSLSALSRTVIVVNPE 618
           FQG+SLSA++R+ ++VNP+
Sbjct: 368 FQGLSLSAITRSTVLVNPD 386