BLASTX nr result

ID: Cnidium21_contig00031662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031662
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552676.1| PREDICTED: ABC transporter B family member 2...   109   3e-22
ref|XP_003518659.1| PREDICTED: ABC transporter B family member 2...   105   3e-21
ref|XP_002284223.2| PREDICTED: ABC transporter B family member 2...   102   3e-20
ref|NP_191092.1| ABC transporter B family member 20 [Arabidopsis...   102   3e-20
gb|AAM19777.1| At2g39480/F12L6.14 [Arabidopsis thaliana]              102   4e-20

>ref|XP_003552676.1| PREDICTED: ABC transporter B family member 20-like [Glycine max]
          Length = 1402

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/72 (76%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
 Frame = +1

Query: 58  AAVPFSRLFACADRLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHL--LSPSNDSPDKL 231
           AAVPFS+LFACADR DW LM  GSVAAAAHGTALVVYLHYFAKIIH+  L P N +  + 
Sbjct: 64  AAVPFSQLFACADRFDWFLMAIGSVAAAAHGTALVVYLHYFAKIIHVLRLDPPNGTSQEQ 123

Query: 232 FDRFTELALTIL 267
           FDRFTELALTI+
Sbjct: 124 FDRFTELALTIV 135


>ref|XP_003518659.1| PREDICTED: ABC transporter B family member 20-like [Glycine max]
          Length = 1402

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
 Frame = +1

Query: 58  AAVPFSRLFACADRLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHL--LSPSNDSPDKL 231
           AAVPFS+LFACADR DW LM  GSVAAAAHGTALV+YLHYFAKIIH+  L P + +  + 
Sbjct: 64  AAVPFSQLFACADRFDWFLMAVGSVAAAAHGTALVLYLHYFAKIIHVLRLDPPHGTSQEQ 123

Query: 232 FDRFTELALTIL 267
           FDRFTELALTI+
Sbjct: 124 FDRFTELALTIV 135


>ref|XP_002284223.2| PREDICTED: ABC transporter B family member 20-like [Vitis vinifera]
          Length = 1410

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/70 (74%), Positives = 58/70 (82%)
 Frame = +1

Query: 58  AAVPFSRLFACADRLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLSPSNDSPDKLFD 237
           AAVPFSRLFACAD LDW LMV GS+AAAAHGTALVVYLHYFAKI+ LL    D+ D+LF 
Sbjct: 61  AAVPFSRLFACADGLDWGLMVIGSLAAAAHGTALVVYLHYFAKIVQLLDVVPDARDELFR 120

Query: 238 RFTELALTIL 267
           R TELA T++
Sbjct: 121 RSTELASTMV 130


>ref|NP_191092.1| ABC transporter B family member 20 [Arabidopsis thaliana]
           gi|75335876|sp|Q9M3B9.1|AB20B_ARATH RecName: Full=ABC
           transporter B family member 20; Short=ABC transporter
           ABCB.20; Short=AtABCB20; AltName: Full=Multidrug
           resistance protein 14; AltName: Full=P-glycoprotein 20
           gi|7019665|emb|CAB75766.1| P-glycoprotein-like
           [Arabidopsis thaliana] gi|332645847|gb|AEE79368.1| ABC
           transporter B family member 20 [Arabidopsis thaliana]
          Length = 1408

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/74 (68%), Positives = 61/74 (82%), Gaps = 4/74 (5%)
 Frame = +1

Query: 58  AAVPFSRLFACADRLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLSPSNDS----PD 225
           AAVPFS+LFACADR DWVLM+ GSVAAAAHGTAL+VYLHYFAKI+ +L+ SNDS     +
Sbjct: 69  AAVPFSQLFACADRFDWVLMIVGSVAAAAHGTALIVYLHYFAKIVDVLAFSNDSSQQRSE 128

Query: 226 KLFDRFTELALTIL 267
             FDR  +L+LTI+
Sbjct: 129 HQFDRLVQLSLTIV 142


>gb|AAM19777.1| At2g39480/F12L6.14 [Arabidopsis thaliana]
          Length = 1407

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/74 (70%), Positives = 60/74 (81%), Gaps = 4/74 (5%)
 Frame = +1

Query: 58  AAVPFSRLFACADRLDWVLMVFGSVAAAAHGTALVVYLHYFAKIIHLLSPSNDS----PD 225
           AAVPFS+LFACADR DWVLMVFGSVAAAAHGTAL+VYLHYFAKI+ +L+   DS     D
Sbjct: 67  AAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLAFPTDSDHLISD 126

Query: 226 KLFDRFTELALTIL 267
             F+R  EL+LTI+
Sbjct: 127 DQFNRLLELSLTIV 140


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