BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031653
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...    99   9e-19
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    94   3e-17
ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Me...    92   1e-16
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...    91   3e-16
ref|NP_001190683.1| RNI-like protein [Arabidopsis thaliana] gi|3...    91   3e-16

>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 51/104 (49%), Positives = 64/104 (61%)
 Frame = -2

Query: 733 MPQLRHLELIGVAMTNNGLQAILDGCPHLESLDLRRCFYINLDGSCGKLCMERIKKLLLP 554
           MP LRHL+LIG  MTN+GL A+LDGCPHLESLD+RRCF +NL G+ GK C E+IK   LP
Sbjct: 209 MPGLRHLQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCKEQIKYFRLP 268

Query: 553 HDSVKGHKFALDSSEDYRAMCGDHGAMYDAMCDDHRAMYDAMYD 422
           HD+   + F             D+G+  +   D+   M D  YD
Sbjct: 269 HDATDDYPFQTSEC--------DYGSPVEDDADESDLMSDYDYD 304


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 52/102 (50%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
 Frame = -2

Query: 733 MPQLRHLELIGVAMTNNGLQAILDGCPHLESLDLRRCFYINLDGSCGKLCMERIKKLLLP 554
           MP L HL+L G  +TN GL AILDGCPHLESLDLR+CF +NL GS GK C E+IK+L LP
Sbjct: 198 MPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIKELRLP 257

Query: 553 HDSVKGHKFALDSSEDYRAMCGDHGAM--YDAMCDDHRAMYD 434
            D      F  D   DY ++  D  A+   D + DD    Y+
Sbjct: 258 CDPTDDCPFEAD--VDYGSLDEDSSAISDIDFLSDDDYDYYE 297


>ref|XP_003593881.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355482929|gb|AES64132.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 208

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 8/97 (8%)
 Frame = -2

Query: 733 MPQLRHLELIGVAMTNNGLQAILDGCPHLESLDLRRCFYINLDGSCGKLCMERIKKLLLP 554
           MP LRHL+L G  M+N+GL+AILDGCP LESLD+R+CF ++L GS GK C E+IK L LP
Sbjct: 22  MPGLRHLQLFGNKMSNDGLRAILDGCPLLESLDIRQCFNLSLRGSLGKKCREQIKDLRLP 81

Query: 553 HDSVKGHKFAL--------DSSEDYRAMCGDHGAMYD 467
           +D+ + + F +        D  EDY +   D   + D
Sbjct: 82  YDATEDYPFQVIAYDYGSPDEDEDYPSGISDMDLLSD 118


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 41/72 (56%), Positives = 52/72 (72%)
 Frame = -2

Query: 733 MPQLRHLELIGVAMTNNGLQAILDGCPHLESLDLRRCFYINLDGSCGKLCMERIKKLLLP 554
           MP+LRHL++ G A+T+ GLQAIL+GCP LESLDLR CF +  +G  G +C E IK L LP
Sbjct: 183 MPKLRHLQIFGNALTDKGLQAILNGCPDLESLDLRHCFNLKFEGELGNMCAENIKILHLP 242

Query: 553 HDSVKGHKFALD 518
           HDS   ++F  D
Sbjct: 243 HDSTDDYEFNTD 254


>ref|NP_001190683.1| RNI-like protein [Arabidopsis thaliana]
           gi|378405161|sp|Q9M0U7.2|FB221_ARATH RecName:
           Full=Putative F-box protein At4g05475
           gi|332657125|gb|AEE82525.1| RNI-like protein
           [Arabidopsis thaliana]
          Length = 309

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -2

Query: 733 MPQLRHLELIGVAMTNNGLQAILDGCPHLES-LDLRRCFYINLDGSCGKLCMERIKKLLL 557
           MP+LRHL+L+G  +TN GL AILDGCPHLE  LD+R+CF INL G+  K CM+RIK+L  
Sbjct: 223 MPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKELRR 282

Query: 556 PHDSVKGHKFALDSS 512
           PHDS   + +++  S
Sbjct: 283 PHDSTADYPYSISVS 297