BLASTX nr result

ID: Cnidium21_contig00031651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031651
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32284.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated...   162   3e-38
emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]   162   3e-38
ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>emb|CBI32284.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/93 (79%), Positives = 84/93 (90%)
 Frame = -2

Query: 280 DVFVTGSYDHSVKVWDVRVGNRGSVVEFNHGKPVEDVIYLPSGGLIATAGGNCVKIWDVI 101
           ++F TGSYDH+VKVWDVRV N  + ++ NHGKPVEDVI+LPSGGLIATAGGNCVKIWDVI
Sbjct: 187 ELFATGSYDHTVKVWDVRVSNSDAAMKINHGKPVEDVIFLPSGGLIATAGGNCVKIWDVI 246

Query: 100 GGGKLLYSMEGHNKTVTSICVGKMGRESGEETQ 2
           GGGKLLYSME HNKTVTSICVGK+GR+ GE +Q
Sbjct: 247 GGGKLLYSMENHNKTVTSICVGKIGRDGGEGSQ 279


>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Vitis vinifera]
          Length = 528

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/93 (78%), Positives = 84/93 (90%)
 Frame = -2

Query: 280 DVFVTGSYDHSVKVWDVRVGNRGSVVEFNHGKPVEDVIYLPSGGLIATAGGNCVKIWDVI 101
           ++F TGSYDH+VKVWDVRV N  + ++ NHGKPVEDVI+LPSGGLIATAGGNCVKIWDVI
Sbjct: 187 ELFATGSYDHTVKVWDVRVSNSDAAMKINHGKPVEDVIFLPSGGLIATAGGNCVKIWDVI 246

Query: 100 GGGKLLYSMEGHNKTVTSICVGKMGRESGEETQ 2
           GGGKLLYSME HNKTVTSICVGK+GR+ GE ++
Sbjct: 247 GGGKLLYSMENHNKTVTSICVGKIGRDGGEGSE 279


>emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
          Length = 570

 Score =  162 bits (410), Expect = 3e-38
 Identities = 73/93 (78%), Positives = 84/93 (90%)
 Frame = -2

Query: 280 DVFVTGSYDHSVKVWDVRVGNRGSVVEFNHGKPVEDVIYLPSGGLIATAGGNCVKIWDVI 101
           ++F TGSYDH+VKVWDVRV N  + ++ NHGKPVEDVI+LPSGGLIATAGGNCVKIWDVI
Sbjct: 187 ELFATGSYDHTVKVWDVRVSNSDAAMKINHGKPVEDVIFLPSGGLIATAGGNCVKIWDVI 246

Query: 100 GGGKLLYSMEGHNKTVTSICVGKMGRESGEETQ 2
           GGGKLLYSME HNKTVTSICVGK+GR+ GE ++
Sbjct: 247 GGGKLLYSMENHNKTVTSICVGKIGRDGGEGSE 279


>ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|222861816|gb|EEE99358.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  160 bits (406), Expect = 8e-38
 Identities = 71/91 (78%), Positives = 85/91 (93%)
 Frame = -2

Query: 280 DVFVTGSYDHSVKVWDVRVGNRGSVVEFNHGKPVEDVIYLPSGGLIATAGGNCVKIWDVI 101
           ++FVTGSYDH+VK+WDVRV N+ SV+E NHG PVEDVI+LPSGG++ATAGGN VKIWD+I
Sbjct: 192 EMFVTGSYDHTVKLWDVRVDNKESVIEVNHGNPVEDVIFLPSGGMVATAGGNSVKIWDLI 251

Query: 100 GGGKLLYSMEGHNKTVTSICVGKMGRESGEE 8
           GGGK++YSME HNKTVTSICVGK+G+ESGEE
Sbjct: 252 GGGKMVYSMESHNKTVTSICVGKVGKESGEE 282


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  160 bits (405), Expect = 1e-37
 Identities = 70/91 (76%), Positives = 86/91 (94%)
 Frame = -2

Query: 280 DVFVTGSYDHSVKVWDVRVGNRGSVVEFNHGKPVEDVIYLPSGGLIATAGGNCVKIWDVI 101
           ++FVTGSYDH+VK+WDVRV ++ SV+E NHGKPVEDVI+LPSGG++ATAGGN +KIWD+I
Sbjct: 192 EIFVTGSYDHTVKLWDVRVDSKESVIEVNHGKPVEDVIFLPSGGMVATAGGNSLKIWDLI 251

Query: 100 GGGKLLYSMEGHNKTVTSICVGKMGRESGEE 8
           GGGK++YSME HNKTVTSICVGK+G+ESGEE
Sbjct: 252 GGGKMVYSMESHNKTVTSICVGKVGKESGEE 282


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