BLASTX nr result

ID: Cnidium21_contig00031649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031649
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516608.1| conserved hypothetical protein [Ricinus comm...    62   4e-08

>ref|XP_002516608.1| conserved hypothetical protein [Ricinus communis]
           gi|223544428|gb|EEF45949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
 Frame = +1

Query: 25  MKGGTSSLNPYAAAYIPLSRRGISDGNKDFEVTASKSGDEGPQ-----PASATTHTQYQK 189
           MK G S LNPYAA+Y+PLS+R  + G  +     +KS   G Q     PA  TT  +  +
Sbjct: 1   MKPGVSRLNPYAASYVPLSKREAA-GKTEVPGLTTKSSHAGDQTIWFGPAEHTTQKKQHE 59

Query: 190 APRSYNVYGTVSEDSKLKGQSVNETYGSSSLYPDEMTEKHKLDDD 324
               Y++       S LK  + +  YGSSS  PD++TEK  +++D
Sbjct: 60  KTSDYDL-------SVLKSHTFHVAYGSSSQNPDDLTEKQTVNED 97


Top