BLASTX nr result

ID: Cnidium21_contig00031620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031620
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...   172   3e-41
emb|CBI32139.3| unnamed protein product [Vitis vinifera]              172   3e-41
emb|CBI34941.3| unnamed protein product [Vitis vinifera]              149   3e-34
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...   142   4e-32
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...   116   2e-24

>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2060

 Score =  172 bits (436), Expect = 3e-41
 Identities = 93/189 (49%), Positives = 121/189 (64%), Gaps = 17/189 (8%)
 Frame = +3

Query: 3   PVGYKSCWHDRITGSVFVCEVLDGGDDGPVFKVQRYPCTKHRIPSSSTVV----WKQNG- 167
           PVGYKS WHD+ITGS FVC+VLD GD GPVFKV+R+PC+   I ++STV+    + QN  
Sbjct: 209 PVGYKSSWHDKITGSFFVCDVLDDGDSGPVFKVRRFPCSMQPIINASTVLSMPNFTQNDV 268

Query: 168 KSREAKDNLPFIYFDDYEYTSLQMILTESNPPCLDSNILSSSP---------ALEDSDSR 320
           K++   DN      DD + +S+QMI +E++PP LD ++LS S            + S   
Sbjct: 269 KNKVGSDNSASFGMDDDDDSSIQMIFSENDPPNLDYDVLSCSQNGLNEDCDVQTKSSSQT 328

Query: 321 EANCR---TSGNKTFNGLGREDSIGEFSVEGRSSISAWKMVSVAFFDACCEAYKQKGVLR 491
           E+NCR   +SG    + L  ED+IGEF VE  SS SAW  VS     ACCEAYKQ GVL+
Sbjct: 329 ESNCRLLQSSGKLVLSNLRVEDNIGEFLVEASSSSSAWSKVSQTVVHACCEAYKQTGVLQ 388

Query: 492 FCCEHDVDK 518
           FCC+HD+D+
Sbjct: 389 FCCKHDLDQ 397


>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  172 bits (436), Expect = 3e-41
 Identities = 93/189 (49%), Positives = 121/189 (64%), Gaps = 17/189 (8%)
 Frame = +3

Query: 3   PVGYKSCWHDRITGSVFVCEVLDGGDDGPVFKVQRYPCTKHRIPSSSTVV----WKQNG- 167
           PVGYKS WHD+ITGS FVC+VLD GD GPVFKV+R+PC+   I ++STV+    + QN  
Sbjct: 76  PVGYKSSWHDKITGSFFVCDVLDDGDSGPVFKVRRFPCSMQPIINASTVLSMPNFTQNDV 135

Query: 168 KSREAKDNLPFIYFDDYEYTSLQMILTESNPPCLDSNILSSSP---------ALEDSDSR 320
           K++   DN      DD + +S+QMI +E++PP LD ++LS S            + S   
Sbjct: 136 KNKVGSDNSASFGMDDDDDSSIQMIFSENDPPNLDYDVLSCSQNGLNEDCDVQTKSSSQT 195

Query: 321 EANCR---TSGNKTFNGLGREDSIGEFSVEGRSSISAWKMVSVAFFDACCEAYKQKGVLR 491
           E+NCR   +SG    + L  ED+IGEF VE  SS SAW  VS     ACCEAYKQ GVL+
Sbjct: 196 ESNCRLLQSSGKLVLSNLRVEDNIGEFLVEASSSSSAWSKVSQTVVHACCEAYKQTGVLQ 255

Query: 492 FCCEHDVDK 518
           FCC+HD+D+
Sbjct: 256 FCCKHDLDQ 264


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score =  149 bits (376), Expect = 3e-34
 Identities = 81/188 (43%), Positives = 115/188 (61%), Gaps = 20/188 (10%)
 Frame = +3

Query: 3   PVGYKSCWHDRITGSVFVCEVLDGGDDGPVFKVQRYPCTKHRIPSSSTVVWK-----QNG 167
           PVGYKSCWHD++TGS+F+C+V DGGD GP+FKV+R  C+   +P+ STV+ +      NG
Sbjct: 288 PVGYKSCWHDKLTGSLFMCDVSDGGDSGPIFKVKRCACSAIPLPNGSTVLCRPNLGQSNG 347

Query: 168 KSREAKDNLPFIYFDDYEYTSLQMILTESNPPCLDSNILS---------------SSPAL 302
           + +E  +++  +  D  E  SLQ +L + +PP ++++ILS               +S  L
Sbjct: 348 QDKEKSNDMISLSMDYDEDGSLQTLLADPSPP-MENDILSCIRSSSNGSCCVQTLNSLLL 406

Query: 303 EDSDSREANCRTSGNKTFNGLGREDSIGEFSVEGRSSISAWKMVSVAFFDACCEAYKQKG 482
           ED+   E    +SG    +    +D IGEFS++GRSS S W +VS  F DACCE YK+ G
Sbjct: 407 EDNSLHE----SSGEFLSDHSRLKDEIGEFSLQGRSSSSVWNLVSQKFIDACCETYKRTG 462

Query: 483 VLRFCCEH 506
            LRF CEH
Sbjct: 463 SLRFFCEH 470


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
           gi|223535313|gb|EEF36988.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 1794

 Score =  142 bits (357), Expect = 4e-32
 Identities = 77/180 (42%), Positives = 102/180 (56%), Gaps = 12/180 (6%)
 Frame = +3

Query: 3   PVGYKSCWHDRITGSVFVCEVLDGGDDGPVFKVQRYPCTKHRIPSSSTVVWKQNGKSREA 182
           PVGYKS WHD+ITGS+FVC++ DGGD GP+FKVQRYPC+    P  ST++++  G   + 
Sbjct: 93  PVGYKSSWHDKITGSLFVCDISDGGDCGPIFKVQRYPCSTTPFPIGSTILFRP-GFGTDN 151

Query: 183 KDNLPFIYFDDYEYTSLQMILTESNPPCLDSNILSSSPALEDSDSREANCRTSGNKTFNG 362
           K +    + D+ E   +QMIL++ +PP LD  + +      D  S        G K  N 
Sbjct: 152 KKSDSTSHTDNNEDIDVQMILSDHSPPHLDFKLSTDVGTSFDEISNSQPTDGLG-KNLNS 210

Query: 363 LGRE------------DSIGEFSVEGRSSISAWKMVSVAFFDACCEAYKQKGVLRFCCEH 506
           + R             D IGEF VEGRSS S W+MVS     +C E YKQ G+ +FCC H
Sbjct: 211 ISRNLGKFSSANRRIGDDIGEFLVEGRSSSSVWRMVSEKLVHSCREVYKQIGICKFCCRH 270


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 1028

 Score =  116 bits (291), Expect = 2e-24
 Identities = 67/178 (37%), Positives = 93/178 (52%), Gaps = 10/178 (5%)
 Frame = +3

Query: 3    PVGYKSCWHDRITGSVFVCEVLDGGDDGPVFKVQRYPCTKHRIPSSSTVVWKQNGKSREA 182
            PVG++SCWHD++TGS+F+ EVLDGGD GP+FKV+R PC+   IP  STV+ K   ++   
Sbjct: 548  PVGFRSCWHDKVTGSIFINEVLDGGDSGPLFKVRRCPCSAFPIPVGSTVLSKGKSENFSI 607

Query: 183  KDNLPFIYFDDYEYTSLQMILTESNPPCLDSNILSSSPALEDSDSREANCRTSGNKTFNG 362
            +        ++    +LQ I ++  PP  D +ILS      D D    + +   +     
Sbjct: 608  EQQKEDGLINNSNDDNLQTIFSDVCPPNED-DILSCLGVCSDRDF-NVHMQNGLHDEAGS 665

Query: 363  LGR----------EDSIGEFSVEGRSSISAWKMVSVAFFDACCEAYKQKGVLRFCCEH 506
            +G+          +D IGE SVE  SS  AWK +S     AC E   QK   R CC H
Sbjct: 666  IGKSGDLSDYQYLKDEIGEISVEDTSSSIAWKRMSYDLIKACSELCNQKNTFRLCCNH 723


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