BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031566
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P23209.1|RT13_DAUCA RecName: Full=Ribosomal protein S13, mito...   229   4e-58
ref|YP_006291804.1| rps13 gene product (mitochondrion) [Daucus c...   225   1e-56
ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus] gi...   220   4e-55
dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana...   214   1e-53
gb|ABW98661.1| ribosomal protein S13 [Malus x domestica]              214   3e-53

>sp|P23209.1|RT13_DAUCA RecName: Full=Ribosomal protein S13, mitochondrial
          Length = 116

 Score =  229 bits (585), Expect = 4e-58
 Identities = 112/116 (96%), Positives = 113/116 (97%)
 Frame = +3

Query: 39  MFYISGARSVAEKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQTI 218
           M YISGAR VA+KQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQ I
Sbjct: 1   MLYISGARLVADKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMI 60

Query: 219 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 386
           GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 116


>ref|YP_006291804.1| rps13 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|12906|emb|CAA38281.1| ribosomal protein S13 [Daucus
           carota] gi|374081938|gb|AEY81130.1| ribosomal protein
           S13 (mitochondrion) [Daucus carota subsp. sativus]
          Length = 116

 Score =  225 bits (573), Expect = 1e-56
 Identities = 111/116 (95%), Positives = 112/116 (96%)
 Frame = +3

Query: 39  MFYISGARSVAEKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQTI 218
           M YISGARSVA+KQVRIA TKMYGIGPKKAIQV YRLGISGNIKIKELTKYQIDQMEQ I
Sbjct: 1   MLYISGARSVADKQVRIASTKMYGIGPKKAIQVRYRLGISGNIKIKELTKYQIDQMEQMI 60

Query: 219 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 386
           GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK
Sbjct: 61  GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 116


>ref|YP_003587259.1| ribosomal protein S13 [Citrullus lanatus]
           gi|259156787|gb|ACV96649.1| ribosomal protein S13
           [Citrullus lanatus]
          Length = 116

 Score =  220 bits (560), Expect = 4e-55
 Identities = 107/116 (92%), Positives = 112/116 (96%)
 Frame = +3

Query: 39  MFYISGARSVAEKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQTI 218
           M YISGAR VA+KQVRIALTK+ GIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ+EQ I
Sbjct: 1   MSYISGARFVADKQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 219 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 386
           GQDH+VHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRK+IRK
Sbjct: 61  GQDHIVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKRIRK 116


>dbj|BAD83467.2| ribosomal protein S13 (mitochondrion) [Nicotiana tabacum]
          Length = 116

 Score =  214 bits (546), Expect = 1e-53
 Identities = 105/116 (90%), Positives = 109/116 (93%)
 Frame = +3

Query: 39  MFYISGARSVAEKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQTI 218
           M YISGAR V ++QVRIALTK+ GIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ+EQ I
Sbjct: 1   MLYISGARLVGDEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 219 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 386
           GQDHVVHWELKRGERADIER ISISCYRGIRHQDGLPLRGQRTHTNARTCRK IRK
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTCRKLIRK 116


>gb|ABW98661.1| ribosomal protein S13 [Malus x domestica]
          Length = 116

 Score =  214 bits (544), Expect = 3e-53
 Identities = 106/116 (91%), Positives = 110/116 (94%)
 Frame = +3

Query: 39  MFYISGARSVAEKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQTI 218
           M YISGAR VA++QVRIALTK+ GIGPKKAIQVCYRLGISGNIKIKELTKYQIDQ+EQ I
Sbjct: 1   MSYISGARLVADEQVRIALTKIDGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQIEQMI 60

Query: 219 GQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK 386
           GQDHVVHWELKRGERADIER ISISCYRGIRHQDGLPLRGQRTHTNART RKQIRK
Sbjct: 61  GQDHVVHWELKRGERADIERLISISCYRGIRHQDGLPLRGQRTHTNARTFRKQIRK 116