BLASTX nr result

ID: Cnidium21_contig00031546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031546
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632957.1| PREDICTED: probable rhamnogalacturonate lyas...   239   2e-61
ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|XP_002518463.1| hypothetical protein RCOM_0903910 [Ricinus c...   177   1e-42
ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyas...   159   2e-37
ref|XP_001769727.1| predicted protein [Physcomitrella patens sub...   157   9e-37

>ref|XP_003632957.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Vitis
           vinifera] gi|302144126|emb|CBI23231.3| unnamed protein
           product [Vitis vinifera]
          Length = 618

 Score =  239 bits (610), Expect = 2e-61
 Identities = 112/149 (75%), Positives = 129/149 (86%)
 Frame = -2

Query: 447 LPGGPPRYQQLKGSVFGTIHSSNDKVEVSFKSTYNASTSGIRLPLTFDLRYILRSGDSGF 268
           LPGG  RYQ +KG  +  +HSSN+ +EVSF+STY+ STSGIRLPL+ DLRYILR+G SGF
Sbjct: 48  LPGGQDRYQLIKGDDYSVVHSSNESIEVSFRSTYDPSTSGIRLPLSIDLRYILRAGVSGF 107

Query: 267 YCYGIYERPPGCRAFDLAQTRMVFKLQRERFHYMAITDEKQRIMPMPEDMDDKRSKQLIV 88
           YCY IYE PPGCRAFD+AQTRMVFKL++ERFHYMAI+DEKQR+MPMPED+   R K+LIV
Sbjct: 108 YCYAIYELPPGCRAFDVAQTRMVFKLRQERFHYMAISDEKQRVMPMPEDLLQNRGKKLIV 167

Query: 87  PESRLLTNPINPDLKGEVDDKYQYSIDNK 1
           PES LL NPINP LKGEVDDKYQYS+DNK
Sbjct: 168 PESVLLVNPINPHLKGEVDDKYQYSMDNK 196


>ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|222860188|gb|EEE97735.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  223 bits (567), Expect = 2e-56
 Identities = 104/149 (69%), Positives = 124/149 (83%)
 Frame = -2

Query: 447 LPGGPPRYQQLKGSVFGTIHSSNDKVEVSFKSTYNASTSGIRLPLTFDLRYILRSGDSGF 268
           LPGG  RYQ + G+ +  I++SNDK+E+SF+STY+ S  G +LPL+ D+RYIL SG SGF
Sbjct: 63  LPGGKDRYQSVNGAEYSVIYNSNDKLEISFRSTYDPSNKGTKLPLSIDIRYILNSGVSGF 122

Query: 267 YCYGIYERPPGCRAFDLAQTRMVFKLQRERFHYMAITDEKQRIMPMPEDMDDKRSKQLIV 88
           +CY IYERP G  AFDL QTRMVFKL+R++FHYMAI+DEKQR+MPMPED+   R KQLIV
Sbjct: 123 HCYAIYERPAGSPAFDLVQTRMVFKLRRDKFHYMAISDEKQRVMPMPEDLLPGRGKQLIV 182

Query: 87  PESRLLTNPINPDLKGEVDDKYQYSIDNK 1
           PES LL NPINPDLKGEVDDKYQYS+DNK
Sbjct: 183 PESVLLVNPINPDLKGEVDDKYQYSMDNK 211


>ref|XP_002518463.1| hypothetical protein RCOM_0903910 [Ricinus communis]
           gi|223542308|gb|EEF43850.1| hypothetical protein
           RCOM_0903910 [Ricinus communis]
          Length = 361

 Score =  177 bits (448), Expect = 1e-42
 Identities = 90/135 (66%), Positives = 104/135 (77%)
 Frame = -2

Query: 405 VFGTIHSSNDKVEVSFKSTYNASTSGIRLPLTFDLRYILRSGDSGFYCYGIYERPPGCRA 226
           V+  +  SN ++EVSFK+TYN S    RLPLT D+ YILRSG SGF C+ +YERP    A
Sbjct: 18  VYTVVERSNGRLEVSFKNTYNPSVGETRLPLTIDISYILRSGVSGFNCFAVYERP----A 73

Query: 225 FDLAQTRMVFKLQRERFHYMAITDEKQRIMPMPEDMDDKRSKQLIVPESRLLTNPINPDL 46
           FDLAQTRMVFKL+RE    + I+DEKQRIMPMPED+   R KQLIVPES LL NPINPD+
Sbjct: 74  FDLAQTRMVFKLRREVNLILRISDEKQRIMPMPEDLLPGRDKQLIVPESFLLVNPINPDI 133

Query: 45  KGEVDDKYQYSIDNK 1
            GEVDDKYQYS+DNK
Sbjct: 134 GGEVDDKYQYSVDNK 148


>ref|XP_004134767.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis
           sativus] gi|449479483|ref|XP_004155611.1| PREDICTED:
           probable rhamnogalacturonate lyase B-like [Cucumis
           sativus]
          Length = 522

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/97 (77%), Positives = 84/97 (86%)
 Frame = -2

Query: 291 LRSGDSGFYCYGIYERPPGCRAFDLAQTRMVFKLQRERFHYMAITDEKQRIMPMPEDMDD 112
           +R+G  GFYCY IYE P  CRAFDLAQTRMVFKL++E+FHYMAI+DEKQRIMPMPED+  
Sbjct: 1   MRTGIPGFYCYAIYEHPSECRAFDLAQTRMVFKLRQEKFHYMAISDEKQRIMPMPEDLRP 60

Query: 111 KRSKQLIVPESRLLTNPINPDLKGEVDDKYQYSIDNK 1
            R ++LIVPES LL NPINPDLKGEVDDKYQYS DNK
Sbjct: 61  GRGEELIVPESVLLVNPINPDLKGEVDDKYQYSEDNK 97


>ref|XP_001769727.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679076|gb|EDQ65528.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 631

 Score =  157 bits (397), Expect = 9e-37
 Identities = 71/147 (48%), Positives = 104/147 (70%)
 Frame = -2

Query: 441 GGPPRYQQLKGSVFGTIHSSNDKVEVSFKSTYNASTSGIRLPLTFDLRYILRSGDSGFYC 262
           GG   +  + G+ F  ++  +++VEVSF   Y+ +  GI  P+  D R++L  G SGFY 
Sbjct: 54  GGRDTFDVISGTSFSVVYKDDNRVEVSFYRPYDPNCGGI--PVNIDKRFVLLRGVSGFYT 111

Query: 261 YGIYERPPGCRAFDLAQTRMVFKLQRERFHYMAITDEKQRIMPMPEDMDDKRSKQLIVPE 82
           YGIY+RP G  AF+  Q R+ FKLQ+++FH+MA+ D++QR+MP PED+   R +QL  PE
Sbjct: 112 YGIYDRPCGWPAFNFNQNRVTFKLQKDKFHFMAVADDRQRVMPCPEDLTPTRCEQLAYPE 171

Query: 81  SRLLTNPINPDLKGEVDDKYQYSIDNK 1
           + +LT+P++PDL GEVDDKYQY++DNK
Sbjct: 172 AHVLTDPVDPDLCGEVDDKYQYTMDNK 198


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