BLASTX nr result

ID: Cnidium21_contig00031544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031544
         (960 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]    83   9e-14
ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...    82   1e-13
ref|XP_002529010.1| transcription factor, putative [Ricinus comm...    81   3e-13
ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...    68   4e-09
gb|ADL36830.1| TCP domain class transcription factor [Malus x do...    68   4e-09

>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score = 83.2 bits (204), Expect = 9e-14
 Identities = 54/141 (38%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
 Frame = +2

Query: 161 PITANAGSGMGDDGLSDKVPS----------AQTGKKNARQPPPHFMSKFNGQGTVELQG 310
           P+T  AG      G S   PS          A T   N  Q P HFM +FN    ++ QG
Sbjct: 413 PVTTGAGGPSAAVGASGAGPSEPHMWALPTAAPTATGNTLQAPLHFMPRFNLASNLDFQG 472

Query: 311 GGANXXXXXXXXXXXXXXXXHEHFGLGMNETNLGMFGSFDAYPRGGFNIKSEQNEALKQK 490
           G AN                 +H GLG++ETNLGM  + +AY RGG N+ SEQN  ++  
Sbjct: 473 GRANPLQLGSMLMQQHPS---QHLGLGVSETNLGMLAALNAYSRGGLNMNSEQNHPMEHH 529

Query: 491 Q---HQDSGATDSREDDENSS 544
           Q   HQ  G TDS ++D NSS
Sbjct: 530 QQHPHQPQG-TDSGDEDPNSS 549


>ref|XP_002264112.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like
           [Vitis vinifera]
          Length = 538

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 54/141 (38%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
 Frame = +2

Query: 161 PITANAGSGMGDDGLSDKVPS----------AQTGKKNARQPPPHFMSKFNGQGTVELQG 310
           P+T  AG      G S   PS          A T   N  Q P HFM +FN    ++ QG
Sbjct: 401 PVTTGAGGPSAAVGASGAGPSEPHMWALPTAAPTTTGNTLQAPLHFMPRFNLASNLDFQG 460

Query: 311 GGANXXXXXXXXXXXXXXXXHEHFGLGMNETNLGMFGSFDAYPRGGFNIKSEQNEALKQK 490
           G AN                 +H GLG++ETNLGM  + +AY RGG N+ SEQN  ++  
Sbjct: 461 GRANPLQLGSMLMQQHPS---QHLGLGVSETNLGMLAALNAYSRGGLNMNSEQNHPMEHH 517

Query: 491 Q---HQDSGATDSREDDENSS 544
           Q   HQ  G TDS ++D NSS
Sbjct: 518 QQHPHQPQG-TDSGDEDPNSS 537


>ref|XP_002529010.1| transcription factor, putative [Ricinus communis]
           gi|223531550|gb|EEF33380.1| transcription factor,
           putative [Ricinus communis]
          Length = 546

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 61/183 (33%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
 Frame = +2

Query: 2   WMLPFTANTGSGVGDDGPFDKVPICPFPITGKCNAGSGLGDDGPSDKVP-IGPFPITANA 178
           WMLP TA  G G               P      A SG    GPS+ VP + PF     A
Sbjct: 399 WMLPVTAGGGGG---------------PAMVATPAASGPA--GPSEPVPQMWPFSTATPA 441

Query: 179 GSGMGDDGLSDKVPSAQTGKKNARQPPPHFMSKFNGQGTVELQGGGANXXXXXXXXXXXX 358
            +  G                N  Q P HF+ +FN    ++  GG  N            
Sbjct: 442 AAASG----------------NTLQAPLHFVPRFNLPANLDFGGGRGNALQLGSMLMQQQ 485

Query: 359 XXXXHEHFGLGMNETNLGMFGSFDAYPRGGFNIKSEQNEALKQ-KQHQDSGATDSREDDE 535
                +H GL M+ETNLGM  + +AY RGG N+ S+QN  L+Q  QHQ    T+S ++D 
Sbjct: 486 PS---QHLGLSMSETNLGMLAALNAYSRGGLNMNSDQNNPLEQHHQHQQPQTTNSGDEDP 542

Query: 536 NSS 544
           NSS
Sbjct: 543 NSS 545


>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 45/131 (34%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
 Frame = +2

Query: 164 ITANAGSGMGDDGLSDKVPSAQTGKKNARQPPPHFMSKFNGQGTVELQGGGANXXXXXXX 343
           ++A   S  G   L  ++     G  N    P HFM +FN    +E Q G  N       
Sbjct: 397 LSAPMASTSGTTTLESQMWPFPMGSSNT---PLHFMPRFNIPPNLEFQSGRGNPLQLGSM 453

Query: 344 XXXXXXXXXHEHFGLGMNETNLGMFGSFDAYPRGGFNIKSEQNEALK----QKQHQDSGA 511
                     +H GLGM ETNLGM  + +AY RGG N+ S+  ++      Q+Q Q    
Sbjct: 454 LMQQQQPS--QHLGLGMAETNLGMLAALNAYSRGGLNMNSDHQQSHSLDHHQQQQQQQQP 511

Query: 512 TDSREDDENSS 544
           TDS EDD N+S
Sbjct: 512 TDSDEDDPNNS 522


>gb|ADL36830.1| TCP domain class transcription factor [Malus x domestica]
          Length = 388

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 20/199 (10%)
 Frame = +2

Query: 8   LPFTANTGSGVGDDG---PFDKVP------ICPFPITGKCNAGSGLGDDGPSDKVPIGPF 160
           LP     G+ VG  G   P   +P      + P P +G  N    L    P    P  P 
Sbjct: 194 LPKQQQQGAEVGSSGVLRPSSILPATAMWAVAPAPTSGTGNTFWML----PVTAGPGVPS 249

Query: 161 PITANAGSGMGDDGLSDKVPSAQTGKKNARQPPPHFMSKFNGQGTVELQGGGANXXXXXX 340
             TA  G+G  +       PS+     +  Q P HFM +FN   ++E Q   A       
Sbjct: 250 MATATFGAGPSEAAQMWTFPSSTASHGSTLQAPMHFMPRFNLPSSLEFQQAAAGGRGSPL 309

Query: 341 XXXXXXXXXX-HEHFGLGMNETNLGMFGSFDAYPRGGFNIKSEQNE----------ALKQ 487
                       +H GLG++++NLGM  + +AY RGG N+ S+Q++            +Q
Sbjct: 310 QLGSMLMQQPPSQHLGLGVSDSNLGMLAALNAYSRGGLNMNSDQHQHNHHHPLDHHHQEQ 369

Query: 488 KQHQDSGATDSREDDENSS 544
           +QHQ    TDS ++  NSS
Sbjct: 370 QQHQPQ-TTDSGDEAPNSS 387


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