BLASTX nr result

ID: Cnidium21_contig00031531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031531
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526047.1| Activator of basal transcription, putative [...   104   4e-20
emb|CBI15766.3| unnamed protein product [Vitis vinifera]              104   6e-20
ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 ...   104   6e-20
emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]    98   4e-18
ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-...    91   7e-16

>ref|XP_002526047.1| Activator of basal transcription, putative [Ricinus communis]
           gi|223534628|gb|EEF36324.1| Activator of basal
           transcription, putative [Ricinus communis]
          Length = 406

 Score =  104 bits (260), Expect = 4e-20
 Identities = 54/92 (58%), Positives = 68/92 (73%)
 Frame = +3

Query: 237 KSATREQRLAFNMSAAKREKDFYLSKVDQSHAQKHIAERLQKKQKVNPEQEGASQIPYNQ 416
           KSA REQ+LA  +SAAKRE+DFYLSKV++S A   I ERL+KKQKV  E  G   +   +
Sbjct: 313 KSAIREQKLALELSAAKRERDFYLSKVEKSRALSSIEERLKKKQKVQLETGGEFSVSIPK 372

Query: 417 VMRQYPQTRPLADKPGEKKQLLSKDVLAGVFG 512
           V+RQ+ QT+P+AD+  E +  LSKDVLAGVFG
Sbjct: 373 VIRQFAQTKPIADRAEENRPRLSKDVLAGVFG 404


>emb|CBI15766.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  104 bits (259), Expect = 6e-20
 Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
 Frame = +3

Query: 237 KSATREQRLAFNMSAAKREKDFYLSKVDQSHAQKHIAERLQKKQKVNPEQEGASQIPYN- 413
           K+A REQ+LA  +SAAKRE+DFYLSKVD+S A   I ERL+KKQKV  +    ++ P N 
Sbjct: 246 KNAIREQKLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPAND 305

Query: 414 ---QVMRQYPQTRPLADKPGEKKQLLSKDVLAGVFG 512
              +V+RQ+PQ  PLADK  E K  LSKD+LAGVFG
Sbjct: 306 QGPKVIRQFPQKPPLADKAAESKPRLSKDILAGVFG 341


>ref|XP_002284683.1| PREDICTED: pre-rRNA-processing protein ESF2 [Vitis vinifera]
          Length = 257

 Score =  104 bits (259), Expect = 6e-20
 Identities = 56/96 (58%), Positives = 69/96 (71%), Gaps = 4/96 (4%)
 Frame = +3

Query: 237 KSATREQRLAFNMSAAKREKDFYLSKVDQSHAQKHIAERLQKKQKVNPEQEGASQIPYN- 413
           K+A REQ+LA  +SAAKRE+DFYLSKVD+S A   I ERL+KKQKV  +    ++ P N 
Sbjct: 159 KNAIREQKLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPAND 218

Query: 414 ---QVMRQYPQTRPLADKPGEKKQLLSKDVLAGVFG 512
              +V+RQ+PQ  PLADK  E K  LSKD+LAGVFG
Sbjct: 219 QGPKVIRQFPQKPPLADKAAESKPRLSKDILAGVFG 254


>emb|CAN83161.1| hypothetical protein VITISV_022556 [Vitis vinifera]
          Length = 486

 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 4/93 (4%)
 Frame = +3

Query: 237 KSATREQRLAFNMSAAKREKDFYLSKVDQSHAQKHIAERLQKKQKVNPEQEGASQIPYN- 413
           K+A REQ+LA  +SAAKRE+DFYLSKVD+S A   I ERL+KKQKV  +    ++ P N 
Sbjct: 159 KNAIREQKLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPAND 218

Query: 414 ---QVMRQYPQTRPLADKPGEKKQLLSKDVLAG 503
              +V+RQ+PQ  PLADK  E K  LSKD+LAG
Sbjct: 219 QGPKVIRQFPQKPPLADKAAESKPRLSKDILAG 251


>ref|XP_004172361.1| PREDICTED: pre-rRNA-processing protein esf2-like, partial [Cucumis
           sativus]
          Length = 326

 Score = 90.9 bits (224), Expect = 7e-16
 Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
 Frame = +3

Query: 237 KSATREQRLAFNMSAAKREKDFYLSKVDQSHAQKHIAERLQKKQKVNPEQEGASQIPYNQ 416
           K A REQ+LA  +SAAKRE+DFYL+KVD+S A   I ERL+KKQK+  + E  S +  +Q
Sbjct: 229 KHAIREQKLALEISAAKRERDFYLAKVDKSRALNSIEERLKKKQKMREDSEMNSTLDDSQ 288

Query: 417 ----VMRQYPQTRPLADKPGEKKQLLSKDVLAGVFG 512
               ++R +PQT+P+AD   + K  LS +VLAGVFG
Sbjct: 289 KLPKLIRSFPQTQPVADFAVQNKPRLSTNVLAGVFG 324


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