BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031500
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   115   5e-24
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...    70   2e-10
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...    70   2e-10

>ref|XP_002305605.1| predicted protein [Populus trichocarpa] gi|222848569|gb|EEE86116.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score =  134 bits (337), Expect = 8e-30
 Identities = 57/152 (37%), Positives = 95/152 (62%)
 Frame = +2

Query: 2   SNPQVSINFFNWSKINLGFQPDLRVECKLAQTLVRFGLSQPARPILDSLIHAHPPSEIVD 181
           +NPQ+S+ FFNW + NL  +PDL+ +C +    V  GL+ P RPI+DSL+  H  S + +
Sbjct: 64  TNPQISLRFFNWVQTNLKLKPDLKSQCHIINICVNSGLTLPVRPIMDSLVKTHHVSVLGE 123

Query: 182 SLVLSCKAELFHSTVFSSVIDCYSKNGMYLKALEVFRKVKDCGYVVSDYSCXXXXXXXXX 361
           ++V SC+ +   S  FS V++CYS  G+++++LE+FRK++  G++ S  +C         
Sbjct: 124 AMVDSCRGKSLKSDAFSFVLECYSHKGLFMESLEMFRKMRGNGFIASGTACNSVLDVLQR 183

Query: 362 XXXXXXCWCFYASMLRNGVLVSQFTWSVVVRI 457
                  WCFY +M+++GVL  + TWS++ +I
Sbjct: 184 ENEIKLAWCFYCAMIKDGVLPDKLTWSLIAQI 215


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/139 (41%), Positives = 84/139 (60%)
 Frame = +2

Query: 5   NPQVSINFFNWSKINLGFQPDLRVECKLAQTLVRFGLSQPARPILDSLIHAHPPSEIVDS 184
           NPQ S++FFNW + NLGFQPDL    ++ +  ++ GL QPA+ ILDSLI     S +VDS
Sbjct: 73  NPQSSLSFFNWVRTNLGFQPDLAAHSQIIRISIQSGLFQPAKGILDSLIETQKVSVLVDS 132

Query: 185 LVLSCKAELFHSTVFSSVIDCYSKNGMYLKALEVFRKVKDCGYVVSDYSCXXXXXXXXXX 364
           ++ +C+ +   S V   V++CYS  G++++ALEVFR++   GYV S  SC          
Sbjct: 133 VIQACRGKDSESPVLGFVLECYSSKGLFIEALEVFRRITIHGYVPSVRSCNALLDSLQRE 192

Query: 365 XXXXXCWCFYASMLRNGVL 421
                 WC   +++RNGVL
Sbjct: 193 NEIKLAWCVCGALIRNGVL 211


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/152 (35%), Positives = 89/152 (58%)
 Frame = +2

Query: 2   SNPQVSINFFNWSKINLGFQPDLRVECKLAQTLVRFGLSQPARPILDSLIHAHPPSEIVD 181
           ++ Q+S+NFFNW+K NL F PDL+ +C + Q  +   L + A+ ILDSLI  +P +  ++
Sbjct: 93  THAQISLNFFNWAKTNLNFNPDLKSQCHVIQLSLGSDLPRAAKKILDSLIKTYPSNLFLE 152

Query: 182 SLVLSCKAELFHSTVFSSVIDCYSKNGMYLKALEVFRKVKDCGYVVSDYSCXXXXXXXXX 361
           ++V +C+ +       + V++ YS  G +L+ LEV++K++  G   S ++C         
Sbjct: 153 TMVQACRGKSSLLCTLNFVLEFYSHKGSFLEGLEVYKKMRVIGCTPSVHACNVLLDALQR 212

Query: 362 XXXXXXCWCFYASMLRNGVLVSQFTWSVVVRI 457
                  WCFY +M+R GVL  +FTWS+V  I
Sbjct: 213 ESEIRLAWCFYCAMIRVGVLPDKFTWSLVAHI 244


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/150 (24%), Positives = 74/150 (49%)
 Frame = +2

Query: 8   PQVSINFFNWSKINLGFQPDLRVECKLAQTLVRFGLSQPARPILDSLIHAHPPSEIVDSL 187
           P+ +++FF+++K +L F+PDL+  C++ +     GL + A  +L  L+  +  S +V  +
Sbjct: 83  PKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEM 142

Query: 188 VLSCKAELFHSTVFSSVIDCYSKNGMYLKALEVFRKVKDCGYVVSDYSCXXXXXXXXXXX 367
               + E+  S   S V++ Y+  G +   LEVF  ++      S  +            
Sbjct: 143 HRWFEGEVSLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKEN 202

Query: 368 XXXXCWCFYASMLRNGVLVSQFTWSVVVRI 457
                 C Y++M+RNG++  + TW ++ +I
Sbjct: 203 QFRVALCLYSAMVRNGIVSDELTWDLIAQI 232


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/150 (24%), Positives = 74/150 (49%)
 Frame = +2

Query: 8   PQVSINFFNWSKINLGFQPDLRVECKLAQTLVRFGLSQPARPILDSLIHAHPPSEIVDSL 187
           P+ +++FF+++K +L F+PDL+  C++ +     GL + A  +L  L+  +  S +V  +
Sbjct: 83  PKTTLDFFDFAKTHLRFEPDLKSHCRVIEVAAESGLLERAEMLLRPLVETNSVSLVVGEM 142

Query: 188 VLSCKAELFHSTVFSSVIDCYSKNGMYLKALEVFRKVKDCGYVVSDYSCXXXXXXXXXXX 367
               + E+  S   S V++ Y+  G +   LEVF  ++      S  +            
Sbjct: 143 HRWFEGEVSLSVSLSLVLEYYALKGSHHNGLEVFGFMRRLRLSPSQSAYNSLLGSLVKEN 202

Query: 368 XXXXCWCFYASMLRNGVLVSQFTWSVVVRI 457
                 C Y++M+RNG++  + TW ++ +I
Sbjct: 203 QFRVALCLYSAMVRNGIVSDELTWDLIAQI 232