BLASTX nr result

ID: Cnidium21_contig00031448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031448
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling co...   159   2e-37
ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling co...   159   2e-37
ref|NP_001241294.1| chromatin structure-remodeling complex prote...   157   6e-37
gb|AFK36059.1| unknown [Lotus japonicus]                              154   5e-36
gb|ABF85669.1| SNF5 [Pisum sativum]                                   153   1e-35

>ref|XP_004147636.1| PREDICTED: chromatin structure-remodeling complex protein BSH-like
           [Cucumis sativus] gi|449498785|ref|XP_004160633.1|
           PREDICTED: chromatin structure-remodeling complex
           protein BSH-like [Cucumis sativus]
          Length = 240

 Score =  159 bits (403), Expect = 2e-37
 Identities = 75/83 (90%), Positives = 82/83 (98%)
 Frame = +2

Query: 59  KFKIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVAVFAKRTVKDLKLPPAFVTQI 238
           KF+IPTA+NLVPIRLDIEIDGQRF+DAFTWNPSDPDSEV VFAKRTVKDLKLPPAF+TQI
Sbjct: 14  KFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQI 73

Query: 239 AQSIQSRLTDFRSYEGQDMYTGE 307
           AQSIQS+LT+FRS+EGQDMYTGE
Sbjct: 74  AQSIQSQLTEFRSFEGQDMYTGE 96


>ref|XP_002270283.1| PREDICTED: chromatin structure-remodeling complex protein BSH
           [Vitis vinifera] gi|297736833|emb|CBI26034.3| unnamed
           protein product [Vitis vinifera]
          Length = 243

 Score =  159 bits (403), Expect = 2e-37
 Identities = 76/91 (83%), Positives = 83/91 (91%)
 Frame = +2

Query: 35  SASKNNSVKFKIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVAVFAKRTVKDLKL 214
           S S  N VKF++PTADNLVPIRLDIEIDG RF+DAFTWNPSDPDSEV VFAKRTVKDLKL
Sbjct: 6   STSSKNPVKFRMPTADNLVPIRLDIEIDGHRFKDAFTWNPSDPDSEVVVFAKRTVKDLKL 65

Query: 215 PPAFVTQIAQSIQSRLTDFRSYEGQDMYTGE 307
           PPAF+TQIAQSIQS+L +FRS+EGQDM TGE
Sbjct: 66  PPAFITQIAQSIQSQLAEFRSFEGQDMQTGE 96


>ref|NP_001241294.1| chromatin structure-remodeling complex protein BSH-like [Glycine
           max] gi|296932945|gb|ADH93593.1| SNF5-type
           chromatin-remodeling complex protein [Glycine max]
           gi|297179845|gb|ADI23919.1| SNF5 [Glycine max]
          Length = 240

 Score =  157 bits (398), Expect = 6e-37
 Identities = 74/86 (86%), Positives = 83/86 (96%)
 Frame = +2

Query: 50  NSVKFKIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVAVFAKRTVKDLKLPPAFV 229
           N VKF++PTA+NLVPIRLDIEI+GQR++DAFTWNPSDPDSEV VFAKRTVKDLKLPPAFV
Sbjct: 11  NPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFV 70

Query: 230 TQIAQSIQSRLTDFRSYEGQDMYTGE 307
           TQIAQSIQS+L++FRSYEGQDMY GE
Sbjct: 71  TQIAQSIQSQLSEFRSYEGQDMYAGE 96


>gb|AFK36059.1| unknown [Lotus japonicus]
          Length = 240

 Score =  154 bits (390), Expect = 5e-36
 Identities = 73/86 (84%), Positives = 80/86 (93%)
 Frame = +2

Query: 50  NSVKFKIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVAVFAKRTVKDLKLPPAFV 229
           N VKF++PTA+NLVPIRLDIEID QR++DAFTWNPSDPDSEV VFAKRTVKDLKLPP FV
Sbjct: 11  NPVKFRMPTAENLVPIRLDIEIDAQRYKDAFTWNPSDPDSEVGVFAKRTVKDLKLPPPFV 70

Query: 230 TQIAQSIQSRLTDFRSYEGQDMYTGE 307
           TQIAQSIQS+L +FRSYEGQDMY GE
Sbjct: 71  TQIAQSIQSQLAEFRSYEGQDMYAGE 96


>gb|ABF85669.1| SNF5 [Pisum sativum]
          Length = 240

 Score =  153 bits (387), Expect = 1e-35
 Identities = 71/86 (82%), Positives = 80/86 (93%)
 Frame = +2

Query: 50  NSVKFKIPTADNLVPIRLDIEIDGQRFRDAFTWNPSDPDSEVAVFAKRTVKDLKLPPAFV 229
           N VKF++PT++NLVP+RLDIEIDG R++DAFTWNPSDPDSEV VFAKRTVKDLKLPP FV
Sbjct: 11  NPVKFRMPTSENLVPVRLDIEIDGHRYKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPPFV 70

Query: 230 TQIAQSIQSRLTDFRSYEGQDMYTGE 307
           TQIAQSIQS+L +FRSYEGQDMY GE
Sbjct: 71  TQIAQSIQSQLAEFRSYEGQDMYAGE 96


Top