BLASTX nr result

ID: Cnidium21_contig00031437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031437
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_002516822.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...    62   6e-08

>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 3/122 (2%)
 Frame = -2

Query: 466 SAPLVYGTNEDNREY-RGLGTLGGCLCISDNTADSELSIWVMKDYGMKESWTKEIVIRDK 290
           +AP   G N+ +R     LG LGGCL   D        IWVMK YG++ESWTKE ++++ 
Sbjct: 263 AAPPHLGPNDKDRTGDMMLGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFILKNP 322

Query: 289 PSRLQYH--IVRPLIFLKSGSILMVCFDRFLFTYCPEYGALQIIECGPKDAYDAMVYVPS 116
            + + ++  + RP+  L +G ILM    + + +Y PE  + + ++      ++A  YVPS
Sbjct: 323 STDIIWYWDLYRPISLLSNGEILMSHKSKAMVSYNPEDRSFRFLKIYGIQNFEANPYVPS 382

Query: 115 FI 110
           F+
Sbjct: 383 FL 384


>ref|XP_002317261.1| predicted protein [Populus trichocarpa] gi|222860326|gb|EEE97873.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
 Frame = -2

Query: 415 LGTLGGCLCISDNTADSELSIWVMKDYGMKESWTKEIVI--RDKPSRLQYHIVRPLIFLK 242
           LG L  CL I D+     L IWVMK+YG+K+SWTKEIVI     PS LQ   ++P++  K
Sbjct: 286 LGVLRDCLFICDSMTLYNLDIWVMKEYGVKDSWTKEIVIAKTSLPSNLQNSFLQPIMVSK 345

Query: 241 SGSILMVCFDRFLFTYCPEYGALQIIECGPKDAY--DAMVYVPSFIRLERFM 92
            G +L+         Y P   +   +    +  Y  +A+  V SF  L   M
Sbjct: 346 DGEVLISSDSNVFVWYDPGSKSFTKVTLPSRVGYEFEAVCSVASFDSLSAIM 397


>ref|XP_002516822.1| conserved hypothetical protein [Ricinus communis]
           gi|223543910|gb|EEF45436.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
 Frame = -2

Query: 415 LGTLGGCLCISDNTADSELSIWVMKDYGMKESWTKEIVIRD-KPSRLQYHIVRPLIFLKS 239
           +G L GCLC+S ++A     IW+MK+YG KESWTK +VI     S+++Y+   P+    S
Sbjct: 215 VGVLRGCLCMSLSSAQKISEIWIMKEYGNKESWTKLLVIGTICLSKIRYNSCEPIFAFDS 274

Query: 238 GSILMVCFDRFLFTY 194
            +ILM+C +  L  Y
Sbjct: 275 DNILMLCDNSVLACY 289


>ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|222871559|gb|EEF08690.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
 Frame = -2

Query: 400 GCLCIS--DNTADSELSIWVMKDYGMKESWTKEIVIRDKPSRLQYHIVRPLIFLKSGSIL 227
           GCL +S     +D +  IW+MK+YG KESWTK+  +++      Y    PLIFL +G IL
Sbjct: 248 GCLGVSFFHTYSDPQYEIWIMKEYGNKESWTKQFTVKNLGFAKLYD---PLIFLNNGLIL 304

Query: 226 MVCFDRFLFTYCPEYGALQIIECGPKDAYD-AMVYVPSFIRLE 101
           M+ +  F+  Y      ++II        + A  Y PSF+ L+
Sbjct: 305 MMQYREFVVCYDTRRKFMEIIRIWQTQGNNYATAYKPSFVSLK 347


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
 Frame = -2

Query: 418 GLGTLGGCLCISDNTADSELSIWVMKDYGMKESWTKEIVIRDKPSRLQYHIVRPLIFLKS 239
           GLG L GCLC++ +   +   +W+MKDYG +ESW K + I   P+   +    P    ++
Sbjct: 298 GLGVLQGCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISEN 357

Query: 238 GSILMVCFDRFLFTYCPEYGALQI--IECGPKDAYDAMVYVPSFI 110
           G +L++ F+  L  Y P   + +   IE G K  +DA VYV + +
Sbjct: 358 GEVLLM-FEFDLILYNPRDNSFKYPKIESG-KGWFDAEVYVETLV 400


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