BLASTX nr result

ID: Cnidium21_contig00031431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031431
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    88   1e-15
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    86   4e-15
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    84   3e-14
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    82   1e-13
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    75   1e-11

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 69/204 (33%), Positives = 98/204 (48%), Gaps = 3/204 (1%)
 Frame = +1

Query: 16  IVMAVYGELGFLGFARLGDKVWTDVNVPSRCFHDIIYHRGSFYAVDTQGDVYVCCIDDDK 195
           I + +  + G L   R  D  WT +        D+I+HRG FYAV+  G + VC    D 
Sbjct: 178 IAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVC----DV 233

Query: 196 ERGGSRGTKIASLKCHSLDRKYLVEPLSGSGLLLLVRYNKIRDIEHYIGIEVKYRTTDFA 375
                R + I   +    D +YLVE  SG  LLL+ RY  +          + YRTT F 
Sbjct: 234 SGSSPRVSIIEMPQQFGGDLQYLVE--SGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQ 291

Query: 376 VWRLDLNYNDSVETPCTLTEVNNLGNGAIFIGRAXXXXXXXXEI--VRPNSIYFTDD-NW 546
           V RLDL      + P     V++LG+ A+F+G          +    + N IY+TDD + 
Sbjct: 292 VCRLDL------KAP-RWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 547 EAYIRRGGGHDMGIFDIERGTIEP 618
           + Y   GG  D+GIF++E G+IEP
Sbjct: 345 DNYDGIGGEQDLGIFNLEDGSIEP 368


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 67/204 (32%), Positives = 95/204 (46%), Gaps = 3/204 (1%)
 Frame = +1

Query: 16  IVMAVYGELGFLGFARLGDKVWTDVNVPSRCFHDIIYHRGSFYAVDTQGDVYVCCIDDDK 195
           I + +  + G L   R  D  WT +        D+I+HRG FYAV+  G + VC    D 
Sbjct: 178 IAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVC----DV 233

Query: 196 ERGGSRGTKIASLKCHSLDRKYLVEPLSGSGLLLLVRYNKIRDIEHYIGIEVKYRTTDFA 375
                R + I   +    D +YLVE  SG  LLL+ RY  +          + YRTT F 
Sbjct: 234 SGSSPRVSIIEMPQQFGGDLQYLVE--SGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQ 291

Query: 376 VWRLDLNYNDSVETPCTLTEVNNLGNGAIFIGRAXXXXXXXXEI--VRPNSIYFTDD-NW 546
           V RLD               V++LG+ A+F+G          +    + N IY+TDD + 
Sbjct: 292 VCRLD-------SKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSE 344

Query: 547 EAYIRRGGGHDMGIFDIERGTIEP 618
           + Y   GG  D+GIF++E G+IEP
Sbjct: 345 DNYDGIGGEQDLGIFNLEDGSIEP 368


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 68/207 (32%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
 Frame = +1

Query: 16  IVMAVYGELGFLGFARLGDKVWTDVNVPSRCFHDIIYHRGSFYAVDTQGDVYVCCIDDDK 195
           + MA+    G L + + GD+ W  V        D+IY  G FYAV+  G + VC    D 
Sbjct: 182 VAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVC----DV 237

Query: 196 ERGGSRGTKIASLKCHSLDRKYLVEPLSGSGLLLLVRYNKIRDIEHYIGIEVKYRTTDFA 375
                + + I + +    D +YLV   SG GLLL+ RY  + D+E  I I   Y+T  F 
Sbjct: 238 NGNSPKVSFIETPRQIGGDMQYLVS--SGDGLLLVTRYLDL-DVEFDIFI---YKTARFE 291

Query: 376 VWRLDLNYNDSVETPCTLTEVNNLGNGAIFIGRAXXXXXXXXEI--VRPNSIYFTDD--- 540
           V++LDLN             V +LG+  +FIG           +     + IY+TDD   
Sbjct: 292 VFKLDLN-------GPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSA 344

Query: 541 -NWEAYIRRGGGHDMGIFDIERGTIEP 618
            N++ +I   G HD+GIF +  G+IEP
Sbjct: 345 NNYDGHI---GEHDLGIFKLSDGSIEP 368


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 5/206 (2%)
 Frame = +1

Query: 16  IVMAVYGELGFLGFARLGDKVWTDVNVPSRCFHDIIYHRGSFYAVDTQGDVYVCCIDDDK 195
           +V+A+  +   L + R GDK W+ V        D+I+  G FYAV+  G + +C I  D 
Sbjct: 181 VVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSDS 240

Query: 196 ERGGSRGTKIASLKCHSLDRKYLVEPLSGSGLLLLVRYNKIR-DIEH-YIGIEVKYRTTD 369
            R     T     +    D +YLV   SG  LLL+ RY  +  + +H  +   + YRT  
Sbjct: 241 PRVSFMETP----RQAGGDMQYLVN--SGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIR 294

Query: 370 FAVWRLDLNYNDSVETPCTLTEVNNLGNGAIFIGRAXXXXXXXXEI--VRPNSIYFTDDN 543
           F V+RLD N    +        ++ LG+ A+FIG          +      N IY+TDD 
Sbjct: 295 FEVFRLDWNGPQWL-------RMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDY 347

Query: 544 WEA-YIRRGGGHDMGIFDIERGTIEP 618
            +A Y    G HD+GIF +   TIEP
Sbjct: 348 LDANYDGHFGDHDLGIFKLCDETIEP 373


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 67/231 (29%), Positives = 106/231 (45%), Gaps = 23/231 (9%)
 Frame = +1

Query: 1   ATPSP-----IVMAVYGELGFLGFARLGDKVWTDVNVPSRCFHDIIYHRGSFYAVDTQGD 165
           +TPSP     ++MA++     L F + GDK W  +      + D++Y++ +FYA+  +  
Sbjct: 154 STPSPSNANCVIMAIHSNYNKLAFCKPGDKRWITLKSEDIQYKDLLYYKDNFYAIG-RSK 212

Query: 166 VYVCCIDDDKERGGSRGTKIASL-KCHSLDRKYLVEPLSGSGLLLLVRYNKIRDIEHYIG 342
           V  C I DD      R    A L K      +YLVE  S   LL ++RY  ++D E    
Sbjct: 213 VVQCDIGDD-----PRVIPFALLPKMGYFQYRYLVE--SSGCLLYVLRYMDLKDNED--P 263

Query: 343 IEVKYRTTDFAVWRLDLN---YNDSVETPCTLTE-----------VNNLGNGAIFIG--R 474
           ++++Y TT F V+ LD +   ++   ET                 + N+   A+ +G  +
Sbjct: 264 LKLRYETTGFKVFDLDSDKRKFSYRYETTTFKVYNFDFDQKKWKLIKNIKEKALLLGHNQ 323

Query: 475 AXXXXXXXXEIVRPNSIYFTDDNWEAYIRRG-GGHDMGIFDIERGTIEPHF 624
           A        +  + N IYF DD  E Y     G HDMG+F+I+    +P F
Sbjct: 324 AISISTKKFDGFKSNHIYFLDDYKEGYFENTYGCHDMGVFNIKTHLFKPIF 374


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