BLASTX nr result

ID: Cnidium21_contig00031420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031420
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264786.1| PREDICTED: uncharacterized protein LOC100255...    87   2e-15
ref|XP_002316604.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_002264786.1| PREDICTED: uncharacterized protein LOC100255600 [Vitis vinifera]
          Length = 1000

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
 Frame = -2

Query: 384 ETQFHGSQNPPESKNVLHNLSQSSQNVFDASVGGRNIQVPLL-----ASAGEQKTPLINS 220
           ET+FHGS  P ES N++H + QSSQ+  +A   G+N   P L     +SA E  +PLI++
Sbjct: 504 ETKFHGSHYPQESWNLVHRVPQSSQHNRNAKGRGKNFNTPFLGSGISSSAAETISPLISN 563

Query: 219 FPGGNMRGPLGSVPRV---------NFSSFESPPTSAQASNGAWPPGNMHKSYPPPGVAT 67
            P  + +  L  +P V         N  + E    +A AS G WPP N+HK++ PP ++ 
Sbjct: 564 IPDADAQ--LRRLPTVASRMGSSSLNSMNVEVQSAAAPASTGMWPPVNVHKTHLPPLLSN 621

Query: 66  PLDVQQVRNHFDLMNTGTTNVH 1
               +Q+RN F+LMN  T  V+
Sbjct: 622 LPQTKQIRNQFNLMNATTAVVN 643


>ref|XP_002316604.1| predicted protein [Populus trichocarpa] gi|222859669|gb|EEE97216.1|
           predicted protein [Populus trichocarpa]
          Length = 1031

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
 Frame = -2

Query: 411 NNISGIREEETQFHGSQNPPESKNVLHNLSQSSQNVFDASVGGRNIQVPLLASA-----G 247
           + + G+  E  Q  GS+   E+ N+  ++ Q S+ + +A   GR+ Q+PL  S      G
Sbjct: 505 SKMPGLLTERNQISGSRYSQEAWNLPPHIRQPSR-LLNAKGRGRDFQMPLSGSGVSSLGG 563

Query: 246 EQKTPLINSFPGGNMRGPLGSVPRVNF---SSFESPPTSAQAS-----NGAWPPGNMHKS 91
           E   PL+   P  +M   L   P +     SS +S  +   +S     +GAWPP N+HKS
Sbjct: 564 ENFNPLVEKLP--DMDAKLVRPPAIASRLGSSIDSNSSGTWSSAVLPLSGAWPPVNVHKS 621

Query: 90  YPPPGVATPLDVQQVRNHFDLMNTGTT 10
            PPP  +T    +Q R+ FD +NT +T
Sbjct: 622 LPPPVHSTFPPEKQSRSQFDPVNTSST 648


Top