BLASTX nr result

ID: Cnidium21_contig00031400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031400
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis v...    74   9e-12
emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]    73   2e-11
ref|XP_002517675.1| eukaryotic translation initiation factor 3 s...    66   3e-09

>ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1702

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 47/101 (46%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
 Frame = -2

Query: 302  KKSTSDVDKAELAQQILLGFIMKSVQHNSDPASQSLIAPTKSEFTENXXXXXXXXXXXXX 123
            KKSTSD +K+ELA+QILL FI+KSVQHN DP S++ +   K E+T +             
Sbjct: 1577 KKSTSDSEKSELARQILLSFIVKSVQHNLDPPSEAAV-NEKHEYTGSSSEAIANDTAIIT 1635

Query: 122  ILYGSEGKANLGS*IGRDEKLNTADVMDNHGD-EGFVVVTK 3
            ILYG+EGK NL S     ++       + +GD EGF VVTK
Sbjct: 1636 ILYGNEGKTNLVSESSDSQQAKPDVNANKNGDGEGFTVVTK 1676


>emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]
          Length = 1658

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
 Frame = -2

Query: 302  KKSTSDVDKAELAQQILLGFIMKSVQHNSDPASQSLIAPTKSEFTENXXXXXXXXXXXXX 123
            KKSTSD +K+ELA QILL FI+KSVQHN DP S++ +   K E+T +             
Sbjct: 1533 KKSTSDSEKSELAXQILLSFIVKSVQHNLDPPSEAAV-NEKHEYTGSSSEAIANDTAIIK 1591

Query: 122  ILYGSEGKANLGS*IGRDEKLNTADVMDNHGD-EGFVVVTK 3
            ILYG+EGK NL S     ++         +GD EGF VVTK
Sbjct: 1592 ILYGNEGKTNLVSESSDSQQAKPDVNTSKNGDGEGFTVVTK 1632


>ref|XP_002517675.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223543307|gb|EEF44839.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1454

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
 Frame = -2

Query: 317  EDVRIKKSTSDVDKAELAQQILLGFIMKSVQHNSDPASQSLIAPTKSEFTENXXXXXXXX 138
            +D+  +K++S+ +KAELA+QILL FI+ SVQHN D  S+ + +  K + +E+        
Sbjct: 1323 KDLSSRKTSSESEKAELARQILLSFIVNSVQHNGDTGSEPVRSEKKLDSSESSSDAIAND 1382

Query: 137  XXXXXILYGSEGKANLGS*IGRDEKLNTADV--MDNHGDEGFVVV 9
                 ILYG+E K    S  G +E+  T DV    N  +EGF+VV
Sbjct: 1383 SAIIKILYGNEEKTKPVSQSGDNEQSKTTDVNKKKNGDNEGFIVV 1427


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