BLASTX nr result

ID: Cnidium21_contig00031394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031394
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32449.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44
ref|XP_002521838.1| pentatricopeptide repeat-containing protein,...   174   5e-42
ref|XP_003556633.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containi...   171   4e-41

>emb|CBI32449.3| unnamed protein product [Vitis vinifera]
          Length = 790

 Score =  183 bits (465), Expect = 1e-44
 Identities = 80/97 (82%), Positives = 89/97 (91%)
 Frame = +1

Query: 58  QWRRSKLAWLCKEIPAHKQGVLVRVLNAQRKWVRQEDATYLAVHCLRIRENETAFRVYKW 237
           QWRRSKLAWLCKE+PAHK   L+R+LNAQ+KWVRQEDATY+AVHC+RIRENET FRVYKW
Sbjct: 118 QWRRSKLAWLCKELPAHKPATLIRILNAQKKWVRQEDATYIAVHCMRIRENETGFRVYKW 177

Query: 238 MRQQHWFQFDFALATKLADYMGKEHKHLKCQEVFNDI 348
           M QQHWFQFDFALATKLADYMGKE K  KC+E+F+DI
Sbjct: 178 MMQQHWFQFDFALATKLADYMGKERKFSKCREIFDDI 214


>ref|XP_002281969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like [Vitis vinifera]
          Length = 823

 Score =  183 bits (465), Expect = 1e-44
 Identities = 80/97 (82%), Positives = 89/97 (91%)
 Frame = +1

Query: 58  QWRRSKLAWLCKEIPAHKQGVLVRVLNAQRKWVRQEDATYLAVHCLRIRENETAFRVYKW 237
           QWRRSKLAWLCKE+PAHK   L+R+LNAQ+KWVRQEDATY+AVHC+RIRENET FRVYKW
Sbjct: 151 QWRRSKLAWLCKELPAHKPATLIRILNAQKKWVRQEDATYIAVHCMRIRENETGFRVYKW 210

Query: 238 MRQQHWFQFDFALATKLADYMGKEHKHLKCQEVFNDI 348
           M QQHWFQFDFALATKLADYMGKE K  KC+E+F+DI
Sbjct: 211 MMQQHWFQFDFALATKLADYMGKERKFSKCREIFDDI 247


>ref|XP_002521838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538876|gb|EEF40474.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  174 bits (442), Expect = 5e-42
 Identities = 73/97 (75%), Positives = 88/97 (90%)
 Frame = +1

Query: 58  QWRRSKLAWLCKEIPAHKQGVLVRVLNAQRKWVRQEDATYLAVHCLRIRENETAFRVYKW 237
           QWRR++LAWLCK++PAHK G LV++LNAQ+KW+RQEDATY+AVHC+RIRENE  FRVYKW
Sbjct: 162 QWRRARLAWLCKQLPAHKAGTLVKILNAQKKWMRQEDATYIAVHCMRIRENEAGFRVYKW 221

Query: 238 MRQQHWFQFDFALATKLADYMGKEHKHLKCQEVFNDI 348
           M QQHW++FDF LATKLADYMGKE K  KC+E+F+DI
Sbjct: 222 MMQQHWYRFDFGLATKLADYMGKERKFAKCREIFDDI 258


>ref|XP_003556633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like [Glycine max]
          Length = 737

 Score =  172 bits (436), Expect = 3e-41
 Identities = 73/97 (75%), Positives = 90/97 (92%)
 Frame = +1

Query: 58  QWRRSKLAWLCKEIPAHKQGVLVRVLNAQRKWVRQEDATYLAVHCLRIRENETAFRVYKW 237
           +WRR+++AWLCKE+PAHK G LVR+LNAQ+KW+RQEDATY+ VHCLR+RENETAF+VYKW
Sbjct: 70  EWRRARVAWLCKELPAHKAGTLVRILNAQKKWMRQEDATYVLVHCLRVRENETAFKVYKW 129

Query: 238 MRQQHWFQFDFALATKLADYMGKEHKHLKCQEVFNDI 348
           M Q++W++FDFALATKLADYMGKE K  KC+EVF+DI
Sbjct: 130 MMQRNWYRFDFALATKLADYMGKERKFSKCREVFDDI 166


>ref|XP_004171087.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15820-like, partial [Cucumis sativus]
          Length = 747

 Score =  171 bits (434), Expect = 4e-41
 Identities = 74/97 (76%), Positives = 88/97 (90%)
 Frame = +1

Query: 58  QWRRSKLAWLCKEIPAHKQGVLVRVLNAQRKWVRQEDATYLAVHCLRIRENETAFRVYKW 237
           QWRRSK+AWLCKE+PA K G ++R+LNAQ+KW+ Q+DATYL VHCLRIRENETAFRVYKW
Sbjct: 74  QWRRSKVAWLCKELPAQKPGTVIRLLNAQKKWMGQDDATYLTVHCLRIRENETAFRVYKW 133

Query: 238 MRQQHWFQFDFALATKLADYMGKEHKHLKCQEVFNDI 348
           M QQHW++FD+AL+TKLADYMGKE K  KC+EVF+DI
Sbjct: 134 MMQQHWYRFDYALSTKLADYMGKERKFSKCREVFDDI 170


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