BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031378
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   329   2e-88
emb|CBI37903.3| unnamed protein product [Vitis vinifera]              323   2e-86
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   323   2e-86
ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   305   4e-81
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...   304   8e-81

>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  329 bits (844), Expect = 2e-88
 Identities = 152/216 (70%), Positives = 188/216 (87%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           ARELFD MPEKN V+WT+L++GYAR ++G++ALELFTKM+   ++PDQFTFSSCLCA AS
Sbjct: 268 ARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASAS 327

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVMGDKNDLILWNT 360
           I SL HGK+IH +LIR+N+RPNTIVVSSLIDMYSKCG L +G  VF +MGDK D++LWNT
Sbjct: 328 IASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNT 387

Query: 361 VISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNACSYSGLVQDGLHFFESITRDH 540
           +IS+LAQHG G+EAIQMF  MV +G++PDRIT IV+LNACS+SGLVQ+GL  +ESIT  H
Sbjct: 388 IISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESITSCH 447

Query: 541 GIFPDQEHYACLIDLLGRAGHFDEVLKQLKRMPCEP 648
           G+ P+QEHYACLIDLLGRAGHFD ++ QL++MPC+P
Sbjct: 448 GVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKP 483



 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 58/231 (25%), Positives = 109/231 (47%), Gaps = 31/231 (13%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           AR+LFD MPEK+ VSW  +V  YA+     +AL  + ++ R  +  ++++F+  L  C  
Sbjct: 136 ARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVK 195

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKC------------------------ 288
           +  L   K+ H  ++ +    N ++ SS++D Y+KC                        
Sbjct: 196 VKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTM 255

Query: 289 -------GKLRIGERVFKVMGDKNDLILWNTVISALAQHGFGEEAIQMFRYMVSIGLQPD 447
                  G +     +F +M +KN  + W ++I+  A+H  G +A+++F  M+++ ++PD
Sbjct: 256 VSGYAQWGDVEAARELFDLMPEKNP-VAWTSLIAGYARHDLGHKALELFTKMMALNIRPD 314

Query: 448 RITFIVILNACSYSGLVQDGLHFFESITRDHGIFPDQEHYACLIDLLGRAG 600
           + TF   L A +    +  G      + R + I P+    + LID+  + G
Sbjct: 315 QFTFSSCLCASASIASLNHGKQIHGYLIRTN-IRPNTIVVSSLIDMYSKCG 364



 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
 Frame = +1

Query: 88  YEALELFTKMIRSRVKPDQFTFSSCLCACASIPSLRHGKEIHAFLIRSNL-RPNTIVVSS 264
           ++A+     + R+ ++    T +  L  CA+  SL+ GK +H  L  + L RPNT + + 
Sbjct: 32  FQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANH 91

Query: 265 LIDMYSKCGKLRIGERVFKVMGDKN------------------------------DLILW 354
           LI+MYSKCG      +VF  M  +N                              D++ W
Sbjct: 92  LINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSW 151

Query: 355 NTVISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNAC 480
           NT++ A A+ GF  +A++ +R +  +G+  +  +F  +LN C
Sbjct: 152 NTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNIC 193


>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  323 bits (827), Expect = 2e-86
 Identities = 155/216 (71%), Positives = 185/216 (85%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           A ELF  MPEKN VSWTAL+SGYAR  MG++ALELFTKM+   V+PDQFTFSSCLCACAS
Sbjct: 277 ANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACAS 336

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVMGDKNDLILWNT 360
           I SL+HGK+IHA+L+R N +PNTIVVS+LIDMYSKCG L IG +VF +MG+K D++LWNT
Sbjct: 337 IASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNT 396

Query: 361 VISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNACSYSGLVQDGLHFFESITRDH 540
           +ISALAQHG GEEAIQM   MV  G +PD+ITF+VILNACS+SGLVQ GL+FFES++ D+
Sbjct: 397 IISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDY 456

Query: 541 GIFPDQEHYACLIDLLGRAGHFDEVLKQLKRMPCEP 648
           GI P QEHYACLIDLLGRAG F+EV+ QL++MP +P
Sbjct: 457 GIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKP 492



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           AR+LFD MPEK+ VSW  +V  +A+     EAL  +++  +  ++ + F+F+  L  C  
Sbjct: 145 ARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVK 204

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVMGDKNDL----- 345
           +  +   +++H  ++ +    N ++ SS++D Y KCG +    ++F  M  ++ L     
Sbjct: 205 LKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTM 264

Query: 346 -------------------------ILWNTVISALAQHGFGEEAIQMFRYMVSIGLQPDR 450
                                    + W  +IS  A++G G +A+++F  M+   ++PD+
Sbjct: 265 VSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQ 324

Query: 451 ITFIVILNACSYSGLVQDGLHFFESITRDHGIFPDQEHYACLIDLLGRAG 600
            TF   L AC+    ++ G      + R +   P+    + LID+  + G
Sbjct: 325 FTFSSCLCACASIASLKHGKQIHAYLLRIN-FQPNTIVVSALIDMYSKCG 373



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
 Frame = +1

Query: 73  RKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACASIPSLRHGKEIHAFLIRSNL-RPNT 249
           +KN   EA+     + R  ++ D  T +S L  CA   +LR GK +H  L  + L RP T
Sbjct: 36  KKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGT 95

Query: 250 IVVSSLIDMYSKCGKLRIGERVFKVMGDKN------------------------------ 339
            + + LI+MY+KCGK     +VF  M  +N                              
Sbjct: 96  FLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEK 155

Query: 340 DLILWNTVISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNAC 480
           D++ WNT++ A AQ G+ +EA++ +     +G+Q +  +F  +L  C
Sbjct: 156 DVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVC 202


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  323 bits (827), Expect = 2e-86
 Identities = 155/216 (71%), Positives = 185/216 (85%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           A ELF  MPEKN VSWTAL+SGYAR  MG++ALELFTKM+   V+PDQFTFSSCLCACAS
Sbjct: 277 ANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACAS 336

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVMGDKNDLILWNT 360
           I SL+HGK+IHA+L+R N +PNTIVVS+LIDMYSKCG L IG +VF +MG+K D++LWNT
Sbjct: 337 IASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNT 396

Query: 361 VISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNACSYSGLVQDGLHFFESITRDH 540
           +ISALAQHG GEEAIQM   MV  G +PD+ITF+VILNACS+SGLVQ GL+FFES++ D+
Sbjct: 397 IISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDY 456

Query: 541 GIFPDQEHYACLIDLLGRAGHFDEVLKQLKRMPCEP 648
           GI P QEHYACLIDLLGRAG F+EV+ QL++MP +P
Sbjct: 457 GIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKP 492



 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 56/230 (24%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           AR+LFD MPEK+ VSW  +V  +A+     EAL  +++  +  ++ + F+F+  L  C  
Sbjct: 145 ARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVK 204

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVMGDKNDL----- 345
           +  +   +++H  ++ +    N ++ SS++D Y KCG +    ++F  M  ++ L     
Sbjct: 205 LKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTM 264

Query: 346 -------------------------ILWNTVISALAQHGFGEEAIQMFRYMVSIGLQPDR 450
                                    + W  +IS  A++G G +A+++F  M+   ++PD+
Sbjct: 265 VSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQ 324

Query: 451 ITFIVILNACSYSGLVQDGLHFFESITRDHGIFPDQEHYACLIDLLGRAG 600
            TF   L AC+    ++ G      + R +   P+    + LID+  + G
Sbjct: 325 FTFSSCLCACASIASLKHGKQIHAYLLRIN-FQPNTIVVSALIDMYSKCG 373



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 31/167 (18%)
 Frame = +1

Query: 73  RKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACASIPSLRHGKEIHAFLIRSNL-RPNT 249
           +KN   EA+     + R  ++ D  T +S L  CA   +LR GK +H  L  + L RP T
Sbjct: 36  KKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGT 95

Query: 250 IVVSSLIDMYSKCGKLRIGERVFKVMGDKN------------------------------ 339
            + + LI+MY+KCGK     +VF  M  +N                              
Sbjct: 96  FLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEK 155

Query: 340 DLILWNTVISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNAC 480
           D++ WNT++ A AQ G+ +EA++ +     +G+Q +  +F  +L  C
Sbjct: 156 DVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVC 202


>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  305 bits (782), Expect = 4e-81
 Identities = 143/216 (66%), Positives = 182/216 (84%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           A ELF  MPEKN VSW+AL+SGYAR ++G+EAL+ FTKM++  + P+Q+TFSSCLCACAS
Sbjct: 280 ASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACAS 339

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVMGDKNDLILWNT 360
           I +L+HGK++H +LIR+  R NTIVVSSLIDMYSKCG L     VF +MG+K D+++WNT
Sbjct: 340 IAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNT 399

Query: 361 VISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNACSYSGLVQDGLHFFESITRDH 540
           +ISALAQ+G GE+A+QMF  MV  GL+PDRITFIVIL+ACS+SGLVQ+GL FF+++T DH
Sbjct: 400 MISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDH 459

Query: 541 GIFPDQEHYACLIDLLGRAGHFDEVLKQLKRMPCEP 648
           G+FPDQEHYACLIDLLGRAG F E++ +L+ M C+P
Sbjct: 460 GVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKP 495



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           AR+LFD M EK+ VSW  +V  YA++    EA+ L+    R  +  + F+F+  L  C  
Sbjct: 148 ARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVK 207

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVM----------- 327
           +  L+  K++H  ++ +    N ++ SS++D YSKCG++R    +F  M           
Sbjct: 208 LKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTI 267

Query: 328 -------GDKNDL------------ILWNTVISALAQHGFGEEAIQMFRYMVSIGLQPDR 450
                  GD N              + W+ +IS  A++  G EA+  F  M+  G+ P++
Sbjct: 268 VSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327

Query: 451 ITFIVILNACSYSGLVQDG 507
            TF   L AC+    ++ G
Sbjct: 328 YTFSSCLCACASIAALKHG 346


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  304 bits (779), Expect = 8e-81
 Identities = 142/216 (65%), Positives = 182/216 (84%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           A ELF  MPEKN VSW+AL+SGYAR ++G+EAL+ FTKM++  + P+Q+TFSSCLCACAS
Sbjct: 280 ASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACAS 339

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVMGDKNDLILWNT 360
           I +L+HGK++H +LIR+  R NTIVVSSLIDMYSKCG L     VF +MG+K D+++WNT
Sbjct: 340 IAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNT 399

Query: 361 VISALAQHGFGEEAIQMFRYMVSIGLQPDRITFIVILNACSYSGLVQDGLHFFESITRDH 540
           +ISALAQ+G GE+A+QMF  MV  GL+PDRITFIVIL+ACS+SGLVQ+GL FF+++T DH
Sbjct: 400 MISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAMTYDH 459

Query: 541 GIFPDQEHYACLIDLLGRAGHFDEVLKQLKRMPCEP 648
           G+FPDQEHY+CLIDLLGRAG F E++ +L+ M C+P
Sbjct: 460 GVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKP 495



 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 30/199 (15%)
 Frame = +1

Query: 1   ARELFDAMPEKNSVSWTALVSGYARKNMGYEALELFTKMIRSRVKPDQFTFSSCLCACAS 180
           AR+LFD M EK+ VSW  +V  YA++    EA+ L+    R  +  + F+F+  L  C  
Sbjct: 148 ARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVK 207

Query: 181 IPSLRHGKEIHAFLIRSNLRPNTIVVSSLIDMYSKCGKLRIGERVFKVM----------- 327
           +  L+  K++H  ++ +    N ++ SS++D Y+KCG++R    +F  M           
Sbjct: 208 LKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTI 267

Query: 328 -------GDKNDL------------ILWNTVISALAQHGFGEEAIQMFRYMVSIGLQPDR 450
                  GD N              + W+ +IS  A++  G EA+  F  M+  G+ P++
Sbjct: 268 VSGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQ 327

Query: 451 ITFIVILNACSYSGLVQDG 507
            TF   L AC+    ++ G
Sbjct: 328 YTFSSCLCACASIAALKHG 346