BLASTX nr result
ID: Cnidium21_contig00031365
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00031365
(2087 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1... 102 1e-63
gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group] 120 1e-62
ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago tr... 103 6e-58
gb|ABA95236.1| AT hook motif-containing protein, putative, expre... 144 8e-51
gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza... 140 6e-50
>gb|AFK13834.1| putative PIF1 DNA helicase/replication protein A1-like protein [Beta
vulgaris subsp. vulgaris]
Length = 2037
Score = 102 bits (254), Expect(4) = 1e-63
Identities = 56/121 (46%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +1
Query: 1426 NGEKLDEKITVDLTTMLHRDNELAKIFRHVRDKFKDTEYVPAKLRLVANRQTDGRDSNTP 1605
N D + +L ML N LAK FR RD+ + +L+L+ +R DGR N P
Sbjct: 880 NASPFDTGVVEELKKMLDEYNPLAKAFRIARDRLCSDDCSNIRLKLIGSRDKDGRRYNLP 939
Query: 1606 TNAYEFAALIAD-DDLSNGRDIVVQYTGGALQRISVLNPSFMPLQYPLLFPRGEDGYRTG 1782
T + A +I D D+ +N RDIV + GGALQRIS L+PS++ LQYPLLFP GED YR
Sbjct: 940 TASEVAALIIGDIDNFANNRDIVAETRGGALQRISELHPSYLALQYPLLFPYGEDSYRID 999
Query: 1783 I 1785
I
Sbjct: 1000 I 1000
Score = 85.1 bits (209), Expect(4) = 1e-63
Identities = 41/89 (46%), Positives = 61/89 (68%)
Frame = +2
Query: 1820 RDMVTMREFHSFRVQHRDDEGHTLIRGGRLFLQYVVDAWACIEHARLVWVLKNQNVLRSD 1999
R V+MREF ++ ++ R +E TL+R +LF Q++VDA+ IE RL ++ NQ LRS+
Sbjct: 1011 RSRVSMREFFAYWIRDRLNEVGTLLRSRKLFQQFIVDAYTMIESERLSYIRANQKNLRSE 1070
Query: 2000 VYNNIVDSVNRGDVDALCVGKRVILPSSF 2086
+Y N+ ++ G+ DA VGKR+ILPSSF
Sbjct: 1071 IYKNVCEAAQLGNTDASSVGKRIILPSSF 1099
Score = 79.3 bits (194), Expect(4) = 1e-63
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 1196 FVKNIRIYNNAFAFTSMGGTIDKTYNDGGGPYVFRLHGQTYHQIGSLYPEDGKKP 1360
F++NIR +N+ FAFTSMGG +D + N+ GPYVFRLHGQ YH+IGSL P G P
Sbjct: 816 FLENIRAFNSMFAFTSMGGKVDSSINECRGPYVFRLHGQNYHRIGSLLPNSGSTP 870
Score = 47.0 bits (110), Expect(4) = 1e-63
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Frame = +1
Query: 859 NKDLKLSTGRNSIIKHSVTGTG-IKSISKRMLNIINRKKKIFAANITP-----LDIGCAD 1020
+ ++L +G++ I ++T + ++ + ++ + ++ + ++IT DIG
Sbjct: 695 SSSVQLKSGKHFIENRTITSSDELQQENNTYSDVQHIQEVAYGSHITEEHTEYWDIGDPT 754
Query: 1021 KICYHCKAHMWEFEQSIAEKKRPNQSFSLCCGKGKVVLPKLKETP 1155
C HC A W E+ +K P +FS CC GKV LP K+ P
Sbjct: 755 YTCEHCGALFWYEERIGKHRKSPKPTFSNCCMNGKVQLPHFKDPP 799
>gb|AAU44208.1| unknown protein [Oryza sativa Japonica Group]
Length = 1525
Score = 120 bits (301), Expect(3) = 1e-62
Identities = 69/159 (43%), Positives = 96/159 (60%), Gaps = 5/159 (3%)
Frame = +1
Query: 1333 IIPGGW*KACFSQLYMFDNERELEERLNFPS---NGEKLDEKITVDLTTMLHRDNELAKI 1503
++P K ++QLY++D E E++ R++ + N E +D I + L ML R+N LA+
Sbjct: 240 LLPEEGDKPRWAQLYIYDTENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQT 299
Query: 1504 FRHVRDKFKDTEYVPAKLRLVANRQTDGRDSNTPTNAYEFAALIADDDLSN--GRDIVVQ 1677
FR RD+FK+ +Y LRL+ R DGR N P +A E AALI +D N GRDI+V
Sbjct: 300 FRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMP-SASEVAALIVNDTSENQKGRDIIVH 358
Query: 1678 YTGGALQRISVLNPSFMPLQYPLLFPRGEDGYRTGIYHR 1794
Y +RIS +P FM +QYPLLFP GEDG+ I +R
Sbjct: 359 YKDTGPRRISENHPKFMAMQYPLLFPYGEDGFTNKILYR 397
Score = 85.5 bits (210), Expect(3) = 1e-62
Identities = 42/96 (43%), Positives = 65/96 (67%)
Frame = +2
Query: 1799 SHKSDNKRDMVTMREFHSFRVQHRDDEGHTLIRGGRLFLQYVVDAWACIEHARLVWVLKN 1978
+H S KR +TM E++++R+Q R ++ L+ +L LQ++VDA ACI RL W+ K+
Sbjct: 399 NHGSKCKRKHLTMLEYYAYRIQQRKNQCMHLLMCEKLTLQFIVDALACIIQYRLDWIRKH 458
Query: 1979 QNVLRSDVYNNIVDSVNRGDVDALCVGKRVILPSSF 2086
Q LR+++Y + D++ RGD A VGKR++LPSSF
Sbjct: 459 QGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSF 494
Score = 84.3 bits (207), Expect(3) = 1e-62
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = +2
Query: 1196 FVKNIRIYNNAFAFTSMGGTIDKTYNDGGGPYVFRLHGQTYHQIGSLYPEDGKKP 1360
++ NIR+YN+ FAFTSMGG +D+ N+G GPYVFR++GQ YH+IG+L PE+G KP
Sbjct: 194 YMDNIRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLPEEGDKP 248
>ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
gi|355484555|gb|AES65758.1| ATP-dependent DNA helicase
PIF1 [Medicago truncatula]
Length = 1873
Score = 103 bits (257), Expect(4) = 6e-58
Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 5/165 (3%)
Frame = +1
Query: 1363 FSQLYMFDNERELEERLNFPSNGE---KLDEKITVDLTTMLHRDNELAKIFRHVRDKFKD 1533
F+QLY++D E R+ S+G+ K+D + +L M+ N+ AK FR VRD +
Sbjct: 585 FAQLYIYDTSNETANRVKHFSSGDSVNKVDTGLVEELKEMVDAFNKYAKKFRQVRDHVEQ 644
Query: 1534 TEYVPAKLRLVANRQTDGRDSNTPTNAYEFAALIADD--DLSNGRDIVVQYTGGALQRIS 1707
+RL+ R D R N PT E AALI D D+ NGRDIV + G +R+
Sbjct: 645 GGTPNFSVRLLGRRTRDARMHNLPT-CDEVAALIIGDSNDMENGRDIVARNAVGEYKRLY 703
Query: 1708 VLNPSFMPLQYPLLFPRGEDGYRTGIYHRGVTQIR**KRHGDYER 1842
P F+PLQYPLLFPRGEDG+ T I R V HG+ +R
Sbjct: 704 ETEPYFIPLQYPLLFPRGEDGFSTNIPIRAVD-------HGNQKR 741
Score = 70.1 bits (170), Expect(4) = 6e-58
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +2
Query: 1196 FVKNIRIYNNAFAFTSMGGTIDKTYNDGGGPYVFRLHGQTYHQIGSLYPEDGKKPVF 1366
+++NIR YN+ F+FTS+GG I + NDGGGP F L GQ YH++G L P+ G P F
Sbjct: 529 YLQNIRSYNSMFSFTSLGGKIQRDRNDGGGPPQFILRGQNYHRMGGLLPDQGSTPKF 585
Score = 66.6 bits (161), Expect(4) = 6e-58
Identities = 33/89 (37%), Positives = 54/89 (60%)
Frame = +2
Query: 1820 RDMVTMREFHSFRVQHRDDEGHTLIRGGRLFLQYVVDAWACIEHARLVWVLKNQNVLRSD 1999
R VTMRE+ ++R+Q R E ++ RL Q+ VD + IE RL ++ NQ +R
Sbjct: 743 RITVTMREWIAYRMQDRVVEYGNIVNSRRLLQQFSVDCYTMIESQRLRYIRNNQKTIRCG 802
Query: 2000 VYNNIVDSVNRGDVDALCVGKRVILPSSF 2086
+ N + ++++RG+ DA VG +++LP SF
Sbjct: 803 ILNGLHEAMDRGETDASNVGVKIVLPPSF 831
Score = 54.3 bits (129), Expect(4) = 6e-58
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +1
Query: 1000 LDIGCADKICYHCKAHMWEFEQSIAEKKRPNQSFSLCCGKGKVVLPKLKETPPELAY 1170
LD+G IC CK+ +W E++ + N FSLCC KGKV+LP L E PPEL Y
Sbjct: 461 LDVGDPVVICRDCKSRVWFEERAEQDMTARNAKFSLCCMKGKVLLPIL-EKPPELLY 516
>gb|ABA95236.1| AT hook motif-containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 1682
Score = 144 bits (362), Expect(2) = 8e-51
Identities = 102/297 (34%), Positives = 149/297 (50%), Gaps = 9/297 (3%)
Frame = +1
Query: 931 SISKRMLNIINRKKKIFAANITPLDIGCADKICYHCKAHMWEFEQSIAEKKRPNQSFSLC 1110
+I++ + + RKKK +++ + G C HC A W E++ + K P SFSLC
Sbjct: 262 NITRNKVAVPPRKKK--KSSVKEWNFGKPTCTCQHCGALFWYEERTRGKGKGP-PSFSLC 318
Query: 1111 CGKGKVVLPKLKETPPELAYAI*M*Q*DVCEKHSN----LQQCFCIYIXXXXXXXXI**W 1278
C +GKV LP LK+ P L+ + + + + F I
Sbjct: 319 CKQGKVDLPTLKKPPTYLSNLMCKEKGKRSRNYMDNIRVYNSMFAFTSMGGKVDREINNG 378
Query: 1279 WRSLCFSFAWSDISSNWIIIPGGW*KACFSQLYMFDNERELEERLNFPS---NGEKLDEK 1449
F + ++P K ++QLY++D E E++ R++ + N E +D
Sbjct: 379 SGPYVFRMNGQNYHRIGTLLPEEGDKPRWAQLYIYDTENEVKNRIDASTSSHNRESIDSH 438
Query: 1450 ITVDLTTMLHRDNELAKIFRHVRDKFKDTEYVPAKLRLVANRQTDGRDSNTPTNAYEFAA 1629
I + L ML R+N LA+ FR RD+FK+ +Y LRL+ R DGR N P +A E AA
Sbjct: 439 IVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMP-SASEVAA 497
Query: 1630 LIADDDLSN--GRDIVVQYTGGALQRISVLNPSFMPLQYPLLFPRGEDGYRTGIYHR 1794
LI +D N GRDI+V Y +RIS +P FMP+QYPLLFP GEDG+ I +R
Sbjct: 498 LIVNDTSENQKGRDIIVHYKDTGPRRISENHPKFMPMQYPLLFPYGEDGFTNKILYR 554
Score = 85.5 bits (210), Expect(2) = 8e-51
Identities = 42/96 (43%), Positives = 65/96 (67%)
Frame = +2
Query: 1799 SHKSDNKRDMVTMREFHSFRVQHRDDEGHTLIRGGRLFLQYVVDAWACIEHARLVWVLKN 1978
+H S KR +TM E++++R+Q R ++ L+ +L LQ++VDA ACI RL W+ K+
Sbjct: 556 NHGSKCKRKHLTMLEYYAYRIQQRKNQCMHLLMCEKLTLQFIVDALACIIQYRLDWIRKH 615
Query: 1979 QNVLRSDVYNNIVDSVNRGDVDALCVGKRVILPSSF 2086
Q LR+++Y + D++ RGD A VGKR++LPSSF
Sbjct: 616 QGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSF 651
>gb|ABA94634.1| AT hook motif-containing protein, putative [Oryza sativa Japonica
Group]
Length = 1618
Score = 140 bits (354), Expect(2) = 6e-50
Identities = 101/297 (34%), Positives = 148/297 (49%), Gaps = 9/297 (3%)
Frame = +1
Query: 931 SISKRMLNIINRKKKIFAANITPLDIGCADKICYHCKAHMWEFEQSIAEKKRPNQSFSLC 1110
+I++ + + RKKK +++ + G C HC A W E++ + K P SFSLC
Sbjct: 262 NITRNKVAVPPRKKK--KSSVKEWNFGKPTCTCQHCGALFWYEERTRGKGKGP-PSFSLC 318
Query: 1111 CGKGKVVLPKLKETPPELAYAI*M*Q*DVCEKHSN----LQQCFCIYIXXXXXXXXI**W 1278
C +GKV LP LK+ P L+ + + + + F I
Sbjct: 319 CKQGKVDLPTLKKPPTYLSNLMCKEKGKRSRNYMDNIRVYNSMFAFTSMGGKVDREINNG 378
Query: 1279 WRSLCFSFAWSDISSNWIIIPGGW*KACFSQLYMFDNERELEERLNFPS---NGEKLDEK 1449
F + ++P K ++QLY++D E E++ R++ + N E +D
Sbjct: 379 SGPYVFRMNGQNYHRIGTLLPEEGDKPRWAQLYIYDTENEVKNRIDASTSSHNRESIDSH 438
Query: 1450 ITVDLTTMLHRDNELAKIFRHVRDKFKDTEYVPAKLRLVANRQTDGRDSNTPTNAYEFAA 1629
I + L ML R+N LA+ FR RD+FK+ +Y LRL+ R DGR N P +A E AA
Sbjct: 439 IVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSLRLIRKRGGDGRQHNMP-SASEVAA 497
Query: 1630 LIADDDLSN--GRDIVVQYTGGALQRISVLNPSFMPLQYPLLFPRGEDGYRTGIYHR 1794
LI +D N GRDI+V Y +RIS +P FM +QYPLLFP GEDG+ I +R
Sbjct: 498 LIVNDTSENQKGRDIIVHYKDTGPRRISENHPKFMAMQYPLLFPYGEDGFTNKILYR 554
Score = 85.5 bits (210), Expect(2) = 6e-50
Identities = 42/96 (43%), Positives = 65/96 (67%)
Frame = +2
Query: 1799 SHKSDNKRDMVTMREFHSFRVQHRDDEGHTLIRGGRLFLQYVVDAWACIEHARLVWVLKN 1978
+H S KR +TM E++++R+Q R ++ L+ +L LQ++VDA ACI RL W+ K+
Sbjct: 556 NHGSKCKRKHLTMLEYYAYRIQQRKNQCMHLLMCEKLTLQFIVDALACIIQYRLDWIRKH 615
Query: 1979 QNVLRSDVYNNIVDSVNRGDVDALCVGKRVILPSSF 2086
Q LR+++Y + D++ RGD A VGKR++LPSSF
Sbjct: 616 QGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSF 651