BLASTX nr result

ID: Cnidium21_contig00031334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031334
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308597.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002281133.1| PREDICTED: probably inactive leucine-rich re...    84   2e-14
emb|CAN61202.1| hypothetical protein VITISV_009745 [Vitis vinifera]    84   2e-14
ref|XP_002324215.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002324214.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002308597.1| predicted protein [Populus trichocarpa] gi|222854573|gb|EEE92120.1|
           predicted protein [Populus trichocarpa]
          Length = 967

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
 Frame = +2

Query: 2   GNNLCGGS-TSGLSPCKGLKTXXXXXXXXXXXXXXXXXXVI---LLLVRRKKIMNLQRME 169
           GN+LCGG  TSGL PC+ +K+                  ++    + +R ++ + L+R+E
Sbjct: 604 GNDLCGGDKTSGLPPCRRVKSPMWWFYVACSLGALVLLALVAFGFVFIRGQRNLELKRVE 663

Query: 170 RSEDGSWELQFMHDKAYKSITIDDILSSVRDENIIVRGKLGNSYIGKSSLAKNMQFLI 343
            +EDG+WELQF + K  KSI IDDIL S+++EN+I RGK G SY GK S+  +M+F++
Sbjct: 664 -NEDGTWELQFFNSKVSKSIAIDDILLSMKEENLISRGKKGASYKGK-SITNDMEFIV 719


>ref|XP_002281133.1| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At2g25790 [Vitis vinifera]
           gi|296081832|emb|CBI20837.3| unnamed protein product
           [Vitis vinifera]
          Length = 967

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +2

Query: 2   GNNLCGG-STSGLSPCKGLKTXXXXXXXXXXXXXXXXXXVI---LLLVRRKKIMNLQRME 169
           GNNLCGG +TSGL PCK LKT                  +    ++ +RR+    L+R+E
Sbjct: 602 GNNLCGGDTTSGLPPCKRLKTPVWWFFVTCLLVVLVVLALAAFAVVFIRRRDGSELKRVE 661

Query: 170 RSEDGSWELQFMHDKAYKSITIDDILSSVRDENIIVRGKLGNSYIGKSSLAKNMQFLI 343
             EDG WE+QF   KA KSITI  ILSS  + N+I RG+ G SY GK+   + MQF++
Sbjct: 662 H-EDGMWEMQFFDSKASKSITIKGILSSTTENNVISRGRKGISYKGKTKNGE-MQFVV 717


>emb|CAN61202.1| hypothetical protein VITISV_009745 [Vitis vinifera]
          Length = 838

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +2

Query: 2   GNNLCGG-STSGLSPCKGLKTXXXXXXXXXXXXXXXXXXVI---LLLVRRKKIMNLQRME 169
           GNNLCGG +TSGL PCK LKT                  +    ++ +RR+    L+R+E
Sbjct: 507 GNNLCGGDTTSGLPPCKRLKTPVWWFFVTCLLVVLVVLALAAFAVVFIRRRDGSELKRVE 566

Query: 170 RSEDGSWELQFMHDKAYKSITIDDILSSVRDENIIVRGKLGNSYIGKSSLAKNMQFLI 343
             EDG WE+QF   KA KSITI  ILSS  + N+I RG+ G SY GK+   + MQF++
Sbjct: 567 H-EDGMWEMQFFDSKASKSITIKGILSSTTENNVISRGRKGISYKGKTKNGE-MQFVV 622


>ref|XP_002324215.1| predicted protein [Populus trichocarpa] gi|222865649|gb|EEF02780.1|
           predicted protein [Populus trichocarpa]
          Length = 836

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
 Frame = +2

Query: 2   GNNLCGGS-TSGLSPCKGLKTXXXXXXXXXXXXXXXXXXVI---LLLVRRKKIMNLQRME 169
           GN+LCGG  TSGL PC+ +K+                  ++    +  R K+   L+R+E
Sbjct: 580 GNDLCGGDKTSGLPPCRRVKSPLWWFYVACSLGALVLLALVASGFVFFRGKRNSELKRVE 639

Query: 170 RSEDGSWELQFMHDKAYKSITIDDILSSVRDENIIVRGKLGNSYIGKSSLAKNMQFLI 343
            +EDG+WEL   + K  +SI I+DI+ S+++EN+I RGK G SY GK S+A +MQF++
Sbjct: 640 -NEDGTWELLLFNSKVSRSIAIEDIIMSLKEENLISRGKEGASYKGK-SIANDMQFIL 695


>ref|XP_002324214.1| predicted protein [Populus trichocarpa] gi|222865648|gb|EEF02779.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
 Frame = +2

Query: 2   GNNLCGGS-TSGLSPCKGLKTXXXXXXXXXXXXXXXXXXVI---LLLVRRKKIMNLQRME 169
           GN+LCGG  TSGL PC+ +K+                  ++    +  R K+   L+R+E
Sbjct: 605 GNDLCGGDKTSGLPPCRRVKSPLWWFYVACSLGALVLLALVASGFVFFRGKRNSELKRVE 664

Query: 170 RSEDGSWELQFMHDKAYKSITIDDILSSVRDENIIVRGKLGNSYIGKSSLAKNMQFLI 343
            +EDG+WEL   + K  +SI I+DI+ S+++EN+I RGK G SY GK S+A +MQF++
Sbjct: 665 -NEDGTWELLLFNSKVSRSIAIEDIIMSLKEENLISRGKEGASYKGK-SIANDMQFIL 720


Top