BLASTX nr result

ID: Cnidium21_contig00031324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031324
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p...    76   3e-12
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...    75   4e-12
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    74   1e-11
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis] gi|223529397|gb|EEF31360.1| Transitional
            endoplasmic reticulum ATPase, putative [Ricinus communis]
          Length = 1029

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
 Frame = +1

Query: 4    ETSIFNEFMY---SAKIYGYCNGLICLILDMDGLGLWNPSTNDFKILPRPGNPFHGGVFY 174
            +   FN F +      I G CNGLIC+ LD+    + NP T + + LP PG+   G  +Y
Sbjct: 703  DLEFFNSFPFYGPDVNIVGSCNGLICIALDLSTFFVLNPGTKECRALPDPGSYPDGVAYY 762

Query: 175  GMGDYDSSVDDYKLVRAAASRFRDDDHGLVYIDSPIKFEVFTGRSYTWRRIADIGTLQCY 354
            G G YD+S DDYK+++   +R    + G  + +S +K  VF+ R+ +WR I D       
Sbjct: 763  GFG-YDASADDYKVLK-GHTRVVVKEAGYEHHESIVK--VFSLRTNSWRTIQDSSPSYLP 818

Query: 355  IQKQAVHLCGSLHW 396
                 + + G+LHW
Sbjct: 819  YPLPGIFVHGALHW 832


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
 Frame = +1

Query: 16  FNEFMYSAKIYGYCNGLIC-LILDMDGLGLWNPSTNDFKILPRPGNPFHGGVFYGMGDYD 192
           + E+ Y  +I G CNGL+C LI D   + +WNPST + + L  PG+      FYG G YD
Sbjct: 96  YPEYSY-IEILGSCNGLVCGLIHDNPLIYIWNPSTRESRELAIPGSS-EDDAFYGFG-YD 152

Query: 193 SSVDDYKLVRAAASRFRDDDHGLVYIDSPIKFEVFTGRSYTWRRIADIGTLQCYIQKQAV 372
             +DDYK+VR + S   +   G    +S  K EVFT +S  WR I D+      ++    
Sbjct: 153 VKLDDYKIVRVSISTSTNSTDG---SNSETKVEVFTLKSNIWRTIQDL-RCSVLLEGPGT 208

Query: 373 HLCGSLHWLMQ 405
              G+LHWL++
Sbjct: 209 LANGALHWLVR 219


>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/123 (34%), Positives = 67/123 (54%)
 Frame = +1

Query: 31  YSAKIYGYCNGLICLILDMDGLGLWNPSTNDFKILPRPGNPFHGGVFYGMGDYDSSVDDY 210
           +  +I G C+GL+CL+ D   + LWNP+T  +K LP+P    +    +G+G Y+ S DDY
Sbjct: 147 FYVRILGSCDGLVCLLDDYGTMFLWNPTTRQYKELPKPKGAVYRMFLHGIG-YNFSTDDY 205

Query: 211 KLVRAAASRFRDDDHGLVYIDSPIKFEVFTGRSYTWRRIADIGTLQCYIQKQAVHLCGSL 390
            +V   ASRF DD       +     E++T ++ TWR+I D+ +      +  +   G L
Sbjct: 206 GVV--FASRFTDDG------NEETTVELYTLKNNTWRKIEDVDSTPEPSGRSGIFWNGGL 257

Query: 391 HWL 399
           +WL
Sbjct: 258 YWL 260


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
 Frame = +1

Query: 49  GYCNGLICLILDMDG-LGLWNPSTNDFKILPRPGNPFHGGVFYGMGDYDSSVDDYKLVRA 225
           G CNGLI  +   D  + +WNPST + + LP P +     +FYG G YDS +DDYK+VR 
Sbjct: 107 GSCNGLISAVFGSDHEITVWNPSTGESRKLPAPTSSTEDKLFYGFG-YDSKLDDYKIVRG 165

Query: 226 AASRFRDDDHGLVYIDSPIKFEVFTGRSYTWRRIADIGTLQCYI--QKQAVHLCGSLHWL 399
           A+S   ++          ++ EVF  +   WR I +   L C +  Q  A+ L G LHWL
Sbjct: 166 ASSASCNE----------VQMEVFNLKGNRWRAIQN---LHCNVRFQGSAIALNGILHWL 212

Query: 400 M 402
           +
Sbjct: 213 V 213


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = +1

Query: 31  YSAKIYGYCNGLICLILDMDGLGLWNPSTNDFKILPRPGNPFHGGVFYGMGDYDSSVDDY 210
           Y   I G C+GLICL +D   L LWNPST D+K +P+P    HG  F+    YDSS DDY
Sbjct: 98  YFIGIMGSCDGLICLFVDYAKLVLWNPSTRDYKEMPKPSCD-HGFDFFAGIGYDSSNDDY 156

Query: 211 KLVRAAASRFRDDDHGLVYIDSPIKFEVFTGRSYTWRRIADIGTLQCYIQKQAVHLC-GS 387
           K V  + +     +         I  EV T ++  WR++ +I      +       C G+
Sbjct: 157 KFVIPSCTTADGSEQ--------IMVEVLTLKTNVWRKVPEICQGTTLVGAYRGLFCNGA 208

Query: 388 LHWL 399
           +HWL
Sbjct: 209 VHWL 212


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