BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031278
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|2...   199   3e-49
ref|XP_002531020.1| pentatricopeptide repeat-containing protein,...   186   1e-45
ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containi...   181   5e-44
ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42

>ref|XP_002326772.1| predicted protein [Populus trichocarpa] gi|222834094|gb|EEE72571.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  199 bits (505), Expect = 3e-49
 Identities = 93/127 (73%), Positives = 110/127 (86%)
 Frame = -2

Query: 383 IRIDAYCKKGSFGDALRLFEAMERENCLPTLQTITTLIHGAGVVRNKSKAKELFDEIPRR 204
           IRIDAYCKKG F DALR+FE MER NCLPTL+T+TTLIHGAGV RN  KA+ELFDEIP+R
Sbjct: 258 IRIDAYCKKGYFADALRIFEEMERANCLPTLETVTTLIHGAGVARNAMKARELFDEIPKR 317

Query: 203 NLQADTGAYNALISSLIRCRDVKSAAGIMDEMDEKNVSHDNVTYHTMFLGFMKSKDIDGF 24
           NLQADTGAYNALISSL++CR+VKSA  +MDEM++ N+ +D++TYHTMFLG MKS  I+G 
Sbjct: 318 NLQADTGAYNALISSLVKCREVKSAIQLMDEMEKNNIHYDDMTYHTMFLGLMKSGSIEGV 377

Query: 23  YGLYHEM 3
             LYH+M
Sbjct: 378 CELYHKM 384


>ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529395|gb|EEF31358.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  186 bits (473), Expect = 1e-45
 Identities = 86/128 (67%), Positives = 105/128 (82%)
 Frame = -2

Query: 386 NIRIDAYCKKGSFGDALRLFEAMERENCLPTLQTITTLIHGAGVVRNKSKAKELFDEIPR 207
           NIRIDAYCKKG FGD LR+FE ME++NC PTL+TITTLIHGAGV RN  KA+ LFDEI +
Sbjct: 276 NIRIDAYCKKGYFGDGLRIFEEMEKDNCPPTLETITTLIHGAGVARNIHKARHLFDEIGK 335

Query: 206 RNLQADTGAYNALISSLIRCRDVKSAAGIMDEMDEKNVSHDNVTYHTMFLGFMKSKDIDG 27
           RNL+ DTGAYNALISSL++C+D++SA  +MDEM+EK++  D+VTYHT+F G MK  D +G
Sbjct: 336 RNLKPDTGAYNALISSLVKCKDIESAMRLMDEMEEKHIGRDSVTYHTIFFGLMKLNDTEG 395

Query: 26  FYGLYHEM 3
              LYH M
Sbjct: 396 VCDLYHRM 403


>ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Glycine max]
          Length = 491

 Score =  181 bits (459), Expect = 5e-44
 Identities = 87/128 (67%), Positives = 106/128 (82%)
 Frame = -2

Query: 386 NIRIDAYCKKGSFGDALRLFEAMERENCLPTLQTITTLIHGAGVVRNKSKAKELFDEIPR 207
           NIRIDAYCKKG FGDALRL E MER N +PT++TITTLIHGAG+VRNK KA +LF EIP 
Sbjct: 235 NIRIDAYCKKGCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRNKDKAWQLFKEIPS 294

Query: 206 RNLQADTGAYNALISSLIRCRDVKSAAGIMDEMDEKNVSHDNVTYHTMFLGFMKSKDIDG 27
           RN+ AD GAYNALI++L+R RD++SA+ +MDEM EK +  D+VTYHTMFLGFM+S+ I+G
Sbjct: 295 RNMVADAGAYNALITALVRTRDIESASSLMDEMVEKCIELDSVTYHTMFLGFMRSRGIEG 354

Query: 26  FYGLYHEM 3
              LY +M
Sbjct: 355 VSKLYQKM 362


>ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
           gi|449520004|ref|XP_004167024.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
          Length = 504

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/128 (64%), Positives = 105/128 (82%)
 Frame = -2

Query: 386 NIRIDAYCKKGSFGDALRLFEAMERENCLPTLQTITTLIHGAGVVRNKSKAKELFDEIPR 207
           +IRIDAYCKKG F D LR+F+ MER  C PTL+TITTLIHGAG+V++K+KA++LFDEIP 
Sbjct: 257 SIRIDAYCKKGCFVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPL 316

Query: 206 RNLQADTGAYNALISSLIRCRDVKSAAGIMDEMDEKNVSHDNVTYHTMFLGFMKSKDIDG 27
           RNL  D GAYNALISSLIR  DVKSAA +M++M+ K++ HD+VTYH MF G ++ +D+ G
Sbjct: 317 RNLCPDIGAYNALISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGG 376

Query: 26  FYGLYHEM 3
           FY LY +M
Sbjct: 377 FYELYIKM 384


>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
           [Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
           protein product [Vitis vinifera]
          Length = 513

 Score =  175 bits (444), Expect = 3e-42
 Identities = 84/128 (65%), Positives = 102/128 (79%)
 Frame = -2

Query: 386 NIRIDAYCKKGSFGDALRLFEAMERENCLPTLQTITTLIHGAGVVRNKSKAKELFDEIPR 207
           NIRIDAYCKKG FGD LRL E ME+ NC PTL+TITTLIHGAGV +N S+A+ELF+EI  
Sbjct: 259 NIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIHGAGVAQNISRARELFNEISI 318

Query: 206 RNLQADTGAYNALISSLIRCRDVKSAAGIMDEMDEKNVSHDNVTYHTMFLGFMKSKDIDG 27
           RNLQ D G YNA +SSLIR R+V+SA  +MDEM+E+ + HD++TYHTMF G M+S  I+G
Sbjct: 319 RNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEG 378

Query: 26  FYGLYHEM 3
              LYH+M
Sbjct: 379 VSELYHKM 386