BLASTX nr result

ID: Cnidium21_contig00031254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031254
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]     97   6e-18
emb|CBI30685.3| unnamed protein product [Vitis vinifera]               57   5e-06

>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
          Length = 1135

 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 10/270 (3%)
 Frame = +3

Query: 9    DDINCPNSETVSRNLSSSISTEPVLQSLKSDTVLXXXXXXXXXXXVASGVTGINIWTNGG 188
            D ++    E+V  NLSSS S     Q    D V              S V  +  WTNGG
Sbjct: 521  DFLDGSKRESVISNLSSSTSPISNSQGPTDDKVRSSFCESQESSADVSSVHSVKFWTNGG 580

Query: 189  LLGLQPSKPPDFNALDCVHDDSMVLSSRGNILNGEGNALETNIFQNSKISKQDRSSKCTT 368
            LLGL+PSKPPDF+  + V+ DS   +          +     + +NS   ++D +SKC+T
Sbjct: 581  LLGLEPSKPPDFSVSNAVNPDSRPSTCSVMQTGDPRSGKLDRLVENSVCIEKDLASKCST 640

Query: 369  SFRDDQEDSISIMKSSLRSLQPHSNSIHERSTNLHHSFSSNQSHKPFLSENSTMVIQTK- 545
            S   DQED +SI + S        ++  E+ ++ H S     +H+  L+    +  +T+ 
Sbjct: 641  SRPGDQEDGVSIKRKSWGFSSAGLDTKPEKLSDSHQSARFGHAHEQGLNVAGPVTPRTEL 700

Query: 546  ---KHDNLDVEASK-SHESSSRIFELGNNLFANSQGKAXXXXXXXXXXXXTTGIS---ER 704
                 +   +E +K ++E+SSR F LG+ L  N   +             ++  S   E 
Sbjct: 701  PVVPDETGSIETNKENNENSSRGFGLGHALLINGFQRNVSLVQDEKSEPASSAKSSAFEE 760

Query: 705  KSVHH--AFQTFSGRTFIEQFGSESPLYHL 788
             S H   ++QT+    F +QFG ESP+  L
Sbjct: 761  TSGHQSVSYQTYPETDFKKQFGRESPINSL 790


>emb|CBI30685.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = +3

Query: 3   EGDDINCPNS----ETVSRNLSSSISTEPVLQSLKSDTVLXXXXXXXXXXXVASGVTGIN 170
           +G  +N PNS    E+V  NLSSS S     Q    D V              S V  + 
Sbjct: 429 QGMSLNSPNSVPSVESVISNLSSSTSPISNSQGPTDDKVRSSFCESQESSADVSSVHSVK 488

Query: 171 IWTNGGLLGLQPSKPPDFN 227
            WTNGGLLGL+PSKPPDF+
Sbjct: 489 FWTNGGLLGLEPSKPPDFS 507


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