BLASTX nr result

ID: Cnidium21_contig00031247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031247
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...   118   4e-25
ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus co...   112   4e-23
ref|XP_002326860.1| chromatin remodeling complex subunit [Populu...   106   2e-21
ref|XP_003540580.1| PREDICTED: uncharacterized protein LOC100812...   106   2e-21
ref|XP_003530837.1| PREDICTED: uncharacterized protein LOC100806...   105   4e-21

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 18/122 (14%)
 Frame = -1

Query: 313  GHTPRNDQSVIYNSLLDVETKRRIILSGTPFQNNFTELYNTLRLVNPKF--NAAMKKY-- 146
            GHTPRN+QS+I+ +L  ++T+RRIILSGTPFQNNF ELYNTL LV PKF    A+++Y  
Sbjct: 676  GHTPRNEQSLIWKALSKIDTERRIILSGTPFQNNFKELYNTLCLVRPKFADRIAVEQYGG 735

Query: 145  ----LRKISKELKSKWSI----------QKLRELKAMINPFVHVHKGKILQKSCPGLKDA 8
                  + S   + KW +           K+ EL+AMI PFVH+HKG ILQ++ PGLKD+
Sbjct: 736  FRGKRGRKSNAARGKWDLLTSSIGKIADDKVEELRAMIEPFVHIHKGTILQENLPGLKDS 795

Query: 7    LI 2
            ++
Sbjct: 796  VV 797


>ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus communis]
            gi|223543519|gb|EEF45050.1| ATP-dependent helicase,
            putative [Ricinus communis]
          Length = 1138

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/128 (46%), Positives = 80/128 (62%), Gaps = 24/128 (18%)
 Frame = -1

Query: 313  GHTPRNDQSVIYNSLLDVETKRRIILSGTPFQNNFTELYNTLRLVNPKF--------NAA 158
            GHTPRND S+++ +L  + T +RIILSGTPFQNNFTEL+NTL LV PKF        N +
Sbjct: 733  GHTPRNDNSLVFKALSRIRTDKRIILSGTPFQNNFTELFNTLLLVRPKFADSLLYNCNES 792

Query: 157  MKKYLR----------------KISKELKSKWSIQKLRELKAMINPFVHVHKGKILQKSC 26
              K  R                 I+K+   ++  +KL E++AMI PFVHV++G ILQ+  
Sbjct: 793  FGKKRRGRKTNGARGTWASLTGSIAKDGNDRFKAEKLEEVRAMIKPFVHVYRGNILQQRL 852

Query: 25   PGLKDALI 2
            PGL+DA++
Sbjct: 853  PGLRDAMV 860


>ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835175|gb|EEE73610.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 576

 Score =  106 bits (265), Expect = 2e-21
 Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 9/113 (7%)
 Frame = -1

Query: 313 GHTPRNDQSVIYNSLLDVETKRRIILSGTPFQNNFTELYNTLRLVNPKFNAAMK------ 152
           GHTPRND+S I+ +L  V+T++RIILSGTPFQNNF ELYNTL LV PKF   +       
Sbjct: 185 GHTPRNDRSRIWKALSKVQTQKRIILSGTPFQNNFDELYNTLCLVKPKFADEISNTDARR 244

Query: 151 ---KYLRKISKELKSKWSIQKLRELKAMINPFVHVHKGKILQKSCPGLKDALI 2
                   I K    K   Q++ EL+ MI  FVHVHKG +L++  PGL+D+++
Sbjct: 245 NWASLTTAIGKVTDDKLEAQRVEELRKMIWQFVHVHKGGVLRERLPGLRDSVV 297


>ref|XP_003540580.1| PREDICTED: uncharacterized protein LOC100812737 [Glycine max]
          Length = 1096

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 16/120 (13%)
 Frame = -1

Query: 313  GHTPRNDQSVIYNSLLDVETKRRIILSGTPFQNNFTELYNTLRLVNPKFNAAMKKYLRKI 134
            GHTPRN  S I+  L +  TK+RI+LSGTPFQNNF ELYN L L+ P F  ++ + L+K 
Sbjct: 701  GHTPRNQNSYIWKVLSESRTKKRILLSGTPFQNNFLELYNILCLMKPSFPDSIPQELKKF 760

Query: 133  --SKELKSKWSI--------------QKLRELKAMINPFVHVHKGKILQKSCPGLKDALI 2
              S++++ +  +              +K++ LK ++NPFVHVHKG ILQK+ PGL+D ++
Sbjct: 761  CQSRQMQERKDVSWDWEPVSSGNTADEKIKLLKLLMNPFVHVHKGSILQKNLPGLRDCVL 820


>ref|XP_003530837.1| PREDICTED: uncharacterized protein LOC100806733 [Glycine max]
          Length = 1175

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/121 (45%), Positives = 82/121 (67%), Gaps = 17/121 (14%)
 Frame = -1

Query: 313  GHTPRNDQSVIYNSLLDVETKRRIILSGTPFQNNFTELYNTLRLVNPKFNAAMKKYLRK- 137
            GHTPRN +S I+  L +  +++R++LSGTPFQNNF ELYN L L+ P F  ++ + L+K 
Sbjct: 779  GHTPRNQRSYIWKVLSESRSQKRVLLSGTPFQNNFLELYNILCLMKPSFPDSIPQELKKF 838

Query: 136  ----ISKELK-SKWSI-----------QKLRELKAMINPFVHVHKGKILQKSCPGLKDAL 5
                + KE K SK++            +K+++LK+++NPFVHVHKG ILQK+ PGL+D +
Sbjct: 839  CQSRLRKERKASKYASYEPIYSGNSADEKIKQLKSLMNPFVHVHKGSILQKNLPGLRDCV 898

Query: 4    I 2
            +
Sbjct: 899  L 899


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