BLASTX nr result
ID: Cnidium21_contig00031234
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00031234
(313 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004169150.1| PREDICTED: zinc finger CCCH domain-containin... 134 1e-29
ref|XP_004134198.1| PREDICTED: zinc finger CCCH domain-containin... 134 1e-29
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici... 132 2e-29
ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containin... 131 6e-29
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 130 1e-28
>ref|XP_004169150.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like,
partial [Cucumis sativus]
Length = 403
Score = 134 bits (336), Expect = 1e-29
Identities = 58/80 (72%), Positives = 61/80 (76%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER+GQPVCQYYMRTGMCKFGASCKYHHP+ GYPLRPGEKECSYYLK
Sbjct: 13 PERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSYYLK 72
Query: 132 TGQCKFGVTCKFHHPHLDGI 73
GQCKFG TCKFHHP G+
Sbjct: 73 NGQCKFGATCKFHHPEPAGL 92
Score = 94.0 bits (232), Expect = 1e-17
Identities = 40/74 (54%), Positives = 47/74 (63%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER GQP CQYYMRTG CKFG+SC+YHHP G PLRPG C+++++
Sbjct: 223 PERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQ 282
Query: 132 TGQCKFGVTCKFHH 91
G CKFG CKF H
Sbjct: 283 RGMCKFGPACKFDH 296
Score = 55.1 bits (131), Expect = 6e-06
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -2
Query: 177 YPLRPGEKECSYYLKTGQCKFGVTCKFHHP 88
+P RPG+ EC YY++TG CKFG +C++HHP
Sbjct: 222 FPERPGQPECQYYMRTGDCKFGSSCRYHHP 251
>ref|XP_004134198.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Cucumis sativus]
Length = 481
Score = 134 bits (336), Expect = 1e-29
Identities = 58/80 (72%), Positives = 61/80 (76%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER+GQPVCQYYMRTGMCKFGASCKYHHP+ GYPLRPGEKECSYYLK
Sbjct: 91 PERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSYYLK 150
Query: 132 TGQCKFGVTCKFHHPHLDGI 73
GQCKFG TCKFHHP G+
Sbjct: 151 NGQCKFGATCKFHHPEPAGL 170
Score = 94.0 bits (232), Expect = 1e-17
Identities = 40/74 (54%), Positives = 47/74 (63%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER GQP CQYYMRTG CKFG+SC+YHHP G PLRPG C+++++
Sbjct: 301 PERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQ 360
Query: 132 TGQCKFGVTCKFHH 91
G CKFG CKF H
Sbjct: 361 RGMCKFGPACKFDH 374
Score = 85.5 bits (210), Expect = 4e-15
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER + C YY+RTG C +G+ C+++HPR YP R G+ C YY++
Sbjct: 45 PERPDEADCIYYLRTGFCGYGSRCRFNHPRERTPALGGSRPGGREYPERIGQPVCQYYMR 104
Query: 132 TGQCKFGVTCKFHHP 88
TG CKFG +CK+HHP
Sbjct: 105 TGMCKFGASCKYHHP 119
Score = 55.1 bits (131), Expect = 6e-06
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -2
Query: 177 YPLRPGEKECSYYLKTGQCKFGVTCKFHHP 88
+P RPG+ EC YY++TG CKFG +C++HHP
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCRYHHP 329
>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 481
Score = 132 bits (333), Expect = 2e-29
Identities = 58/82 (70%), Positives = 62/82 (75%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PERVGQPVCQYYMRTG CKFGASCKYHHP+ GYPLRPGEKEC+YY+K
Sbjct: 91 PERVGQPVCQYYMRTGTCKFGASCKYHHPKQGGGSANPVSLNYYGYPLRPGEKECTYYVK 150
Query: 132 TGQCKFGVTCKFHHPHLDGIHI 67
TGQCKFGVTCKFHHP + I
Sbjct: 151 TGQCKFGVTCKFHHPQPANLQI 172
Score = 99.4 bits (246), Expect = 3e-19
Identities = 43/75 (57%), Positives = 48/75 (64%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER GQP CQYYM+TG CKFG+SCKYHHP G PLRPG C++Y +
Sbjct: 298 PERPGQPECQYYMKTGDCKFGSSCKYHHPPELIAPKTNVVLSPMGLPLRPGAPHCTHYTQ 357
Query: 132 TGQCKFGVTCKFHHP 88
GQCKFG CKF HP
Sbjct: 358 RGQCKFGPACKFDHP 372
Score = 84.0 bits (206), Expect = 1e-14
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER + C YY+RTG C +G+ C+++HPR +P R G+ C YY++
Sbjct: 45 PERPEEADCIYYLRTGFCGYGSRCRFNHPRDRGAVLGAARAGAAEFPERVGQPVCQYYMR 104
Query: 132 TGQCKFGVTCKFHHPHLDG 76
TG CKFG +CK+HHP G
Sbjct: 105 TGTCKFGASCKYHHPKQGG 123
Score = 57.4 bits (137), Expect = 1e-06
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -2
Query: 177 YPLRPGEKECSYYLKTGQCKFGVTCKFHHP 88
+P RPG+ EC YY+KTG CKFG +CK+HHP
Sbjct: 297 FPERPGQPECQYYMKTGDCKFGSSCKYHHP 326
>ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 484
Score = 131 bits (329), Expect = 6e-29
Identities = 57/82 (69%), Positives = 61/82 (74%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PERVGQPVCQYYMRTG CKFGASCKYHHPR GYPLR G+KECSYY+K
Sbjct: 91 PERVGQPVCQYYMRTGSCKFGASCKYHHPRQVPGTATPVPLNYYGYPLRVGQKECSYYVK 150
Query: 132 TGQCKFGVTCKFHHPHLDGIHI 67
TGQCKFG TCKFHHP G+ +
Sbjct: 151 TGQCKFGATCKFHHPQPAGVQV 172
Score = 85.1 bits (209), Expect = 5e-15
Identities = 37/75 (49%), Positives = 43/75 (57%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER QP C +YM+TG CKFG C+YHHP G PLRPG C++Y +
Sbjct: 303 PERPDQPECHHYMKTGDCKFGPLCRYHHPPDKSAPKANVTLSPVGLPLRPGAPPCTHYTQ 362
Query: 132 TGQCKFGVTCKFHHP 88
G CKFG CKF HP
Sbjct: 363 RGVCKFGSACKFDHP 377
Score = 80.9 bits (198), Expect = 1e-13
Identities = 31/75 (41%), Positives = 43/75 (57%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
P R + C YY+RTG C +G C+++HPR +P R G+ C YY++
Sbjct: 45 PMRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAPRTGGEFPERVGQPVCQYYMR 104
Query: 132 TGQCKFGVTCKFHHP 88
TG CKFG +CK+HHP
Sbjct: 105 TGSCKFGASCKYHHP 119
>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
product [Vitis vinifera]
Length = 478
Score = 130 bits (327), Expect = 1e-28
Identities = 57/82 (69%), Positives = 61/82 (74%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PERVGQPVCQ+YM+TG CKFGASCKYHHPR GYPLRPGEKECSYY+K
Sbjct: 93 PERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYVK 152
Query: 132 TGQCKFGVTCKFHHPHLDGIHI 67
TG CKFG TCKFHHP D I +
Sbjct: 153 TGLCKFGETCKFHHPQPDSIQL 174
Score = 100 bits (248), Expect = 2e-19
Identities = 44/75 (58%), Positives = 49/75 (65%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER GQP CQYYMRTG CKFG+SCKYHHP G PLRPG +C++Y +
Sbjct: 301 PERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQ 360
Query: 132 TGQCKFGVTCKFHHP 88
G CKFG TCKF HP
Sbjct: 361 RGICKFGPTCKFDHP 375
Score = 84.3 bits (207), Expect = 9e-15
Identities = 33/79 (41%), Positives = 46/79 (58%)
Frame = -2
Query: 312 PERVGQPVCQYYMRTGMCKFGASCKYHHPRHXXXXXXXXXXXXXGYPLRPGEKECSYYLK 133
PER + C YY++TG C +GA C+++HPR +P R G+ C +Y+K
Sbjct: 47 PERPDEADCIYYLKTGFCGYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMK 106
Query: 132 TGQCKFGVTCKFHHPHLDG 76
TG CKFG +CK+HHP G
Sbjct: 107 TGTCKFGASCKYHHPRQGG 125
Score = 56.2 bits (134), Expect = 3e-06
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -2
Query: 177 YPLRPGEKECSYYLKTGQCKFGVTCKFHHP 88
+P RPG+ EC YY++TG CKFG +CK+HHP
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCKYHHP 329