BLASTX nr result

ID: Cnidium21_contig00031213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031213
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521434.1| Vacuolar protein sorting-associated protein ...   182   2e-44
ref|XP_002305661.1| predicted protein [Populus trichocarpa] gi|1...   181   7e-44
ref|XP_002273704.1| PREDICTED: vacuolar protein sorting-associat...   180   9e-44
ref|XP_004134727.1| PREDICTED: vacuolar protein sorting-associat...   179   3e-43
ref|XP_003529301.1| PREDICTED: vacuolar protein sorting-associat...   175   3e-43

>ref|XP_002521434.1| Vacuolar protein sorting-associated protein VPS28, putative
           [Ricinus communis] gi|223539333|gb|EEF40924.1| Vacuolar
           protein sorting-associated protein VPS28, putative
           [Ricinus communis]
          Length = 209

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/120 (74%), Positives = 98/120 (81%)
 Frame = +2

Query: 143 KLWNDKQEREMYENFAELFAIIKATEKIEKAYVRDIISSSDYEVECQKLIAHFKTLSSTL 322
           KLWNDK+EREMYENFAEL+AIIKATEK+EKAY+RDIISSSDYE ECQKLIAHFKTL+STL
Sbjct: 4   KLWNDKREREMYENFAELYAIIKATEKLEKAYIRDIISSSDYETECQKLIAHFKTLASTL 63

Query: 323 KYAIPSVEKFHETYKMDCPPAINRLVVSGVPATVEHRXXXXXXXXXXXXXXXXCVQNFIT 502
           K  +PS+E+F +TYKMDCP AINRLV SGVPATVEHR                CVQNFIT
Sbjct: 64  KDIVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAASSATTSAAIVAECVQNFIT 123


>ref|XP_002305661.1| predicted protein [Populus trichocarpa] gi|118483725|gb|ABK93756.1|
           unknown [Populus trichocarpa]
           gi|222848625|gb|EEE86172.1| predicted protein [Populus
           trichocarpa]
          Length = 209

 Score =  181 bits (458), Expect = 7e-44
 Identities = 88/120 (73%), Positives = 99/120 (82%)
 Frame = +2

Query: 143 KLWNDKQEREMYENFAELFAIIKATEKIEKAYVRDIISSSDYEVECQKLIAHFKTLSSTL 322
           KLWNDK+EREMYENFAEL+AIIKATEK+EKAYVRDIISSS+YE+ECQKLIAHFKTL+S+L
Sbjct: 4   KLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSSEYEMECQKLIAHFKTLASSL 63

Query: 323 KYAIPSVEKFHETYKMDCPPAINRLVVSGVPATVEHRXXXXXXXXXXXXXXXXCVQNFIT 502
           K  +PS+E+F +TYKMDCP AINRLV SGVPATVEHR                CVQNFIT
Sbjct: 64  KDTVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAAVSSTTSASIVAECVQNFIT 123


>ref|XP_002273704.1| PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2
           isoform 3 [Vitis vinifera]
           gi|225470410|ref|XP_002273673.1| PREDICTED: vacuolar
           protein sorting-associated protein 28 homolog 2 isoform
           2 [Vitis vinifera] gi|225470412|ref|XP_002273612.1|
           PREDICTED: vacuolar protein sorting-associated protein
           28 homolog 2 isoform 1 [Vitis vinifera]
           gi|147776671|emb|CAN74473.1| hypothetical protein
           VITISV_001093 [Vitis vinifera]
           gi|302144239|emb|CBI23477.3| unnamed protein product
           [Vitis vinifera]
          Length = 209

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/120 (74%), Positives = 98/120 (81%)
 Frame = +2

Query: 143 KLWNDKQEREMYENFAELFAIIKATEKIEKAYVRDIISSSDYEVECQKLIAHFKTLSSTL 322
           KLWNDK+EREMYENFAEL+AIIKATEK+EKAYVRDIISS++YE ECQKLIAHFKTL+STL
Sbjct: 4   KLWNDKREREMYENFAELYAIIKATEKLEKAYVRDIISSAEYEPECQKLIAHFKTLASTL 63

Query: 323 KYAIPSVEKFHETYKMDCPPAINRLVVSGVPATVEHRXXXXXXXXXXXXXXXXCVQNFIT 502
           K  IPS+E+F +TYKMDCP AINRLV SGVPATVEHR                CVQNFIT
Sbjct: 64  KDTIPSIERFADTYKMDCPAAINRLVTSGVPATVEHRSAAAASATTSAAVVAECVQNFIT 123


>ref|XP_004134727.1| PREDICTED: vacuolar protein sorting-associated protein 28 homolog
           2-like [Cucumis sativus]
           gi|449479366|ref|XP_004155580.1| PREDICTED: vacuolar
           protein sorting-associated protein 28 homolog 2-like
           [Cucumis sativus]
          Length = 209

 Score =  179 bits (453), Expect = 3e-43
 Identities = 86/120 (71%), Positives = 98/120 (81%)
 Frame = +2

Query: 143 KLWNDKQEREMYENFAELFAIIKATEKIEKAYVRDIISSSDYEVECQKLIAHFKTLSSTL 322
           KLWNDK+EREMY+NFAEL+AIIKATEK+EKAY+RDIISSSDYE EC KLIAHFKTL+STL
Sbjct: 4   KLWNDKREREMYDNFAELYAIIKATEKLEKAYIRDIISSSDYEAECFKLIAHFKTLASTL 63

Query: 323 KYAIPSVEKFHETYKMDCPPAINRLVVSGVPATVEHRXXXXXXXXXXXXXXXXCVQNFIT 502
           K  +PS+E+F +TYKMDCP AINRLV++GVPATVEHR                CVQNFIT
Sbjct: 64  KDTVPSIERFADTYKMDCPAAINRLVITGVPATVEHRAAAAASATTSAAIVAECVQNFIT 123


>ref|XP_003529301.1| PREDICTED: vacuolar protein sorting-associated protein 28 homolog
           2-like isoform 2 [Glycine max]
          Length = 254

 Score =  175 bits (443), Expect(2) = 3e-43
 Identities = 84/120 (70%), Positives = 97/120 (80%)
 Frame = +2

Query: 143 KLWNDKQEREMYENFAELFAIIKATEKIEKAYVRDIISSSDYEVECQKLIAHFKTLSSTL 322
           KLWNDK+EREMY+NF EL+AIIKATE++EKAYVRDIIS  +YE+ECQKLIAHFKTL+STL
Sbjct: 49  KLWNDKREREMYDNFGELYAIIKATERLEKAYVRDIISPQEYELECQKLIAHFKTLASTL 108

Query: 323 KYAIPSVEKFHETYKMDCPPAINRLVVSGVPATVEHRXXXXXXXXXXXXXXXXCVQNFIT 502
           K  +PS+E+F +TYKM+CP AINRLVVSGVPATVEHR                CVQNFIT
Sbjct: 109 KDTVPSIERFADTYKMECPAAINRLVVSGVPATVEHRATVAASASTSAAIVAECVQNFIT 168



 Score = 25.0 bits (53), Expect(2) = 3e-43
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +1

Query: 61 CACPVLFSN 87
          CACPVLFSN
Sbjct: 19 CACPVLFSN 27


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