BLASTX nr result

ID: Cnidium21_contig00031184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031184
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_003626114.1| hypothetical protein MTR_7g111180 [Medicago ...    75   1e-11
ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arab...    73   4e-11
gb|AAM64547.1| unknown [Arabidopsis thaliana]                          73   4e-11

>ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|222871406|gb|EEF08537.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/76 (53%), Positives = 57/76 (75%)
 Frame = +2

Query: 101 SESMSYTDMEKRQLFLRSYHFSRKKSLSDKIKISFFRVKKVIRVRLRSAKKIRKIAWFKL 280
           S S S   MEKRQLFLRSY F RK++L+++IK S  R KKV+ +RLRSA+KIR++ W +L
Sbjct: 46  SSSSSVVMMEKRQLFLRSYQFCRKRTLTERIKGSLIRAKKVMWLRLRSARKIRRLVWSRL 105

Query: 281 KHSFLFTSRNKRFLPL 328
           +++F +  R +RFL L
Sbjct: 106 RYAF-YCRRRRRFLRL 120


>ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|222838651|gb|EEE77016.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 38/68 (55%), Positives = 54/68 (79%)
 Frame = +2

Query: 125 MEKRQLFLRSYHFSRKKSLSDKIKISFFRVKKVIRVRLRSAKKIRKIAWFKLKHSFLFTS 304
           MEKRQLFLRSY F RK++L+++IK S  R KKV+ +RLRSA+KIR++ W +L+++F +  
Sbjct: 1   MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKKVMWLRLRSARKIRRLVWSRLRYAF-YCR 59

Query: 305 RNKRFLPL 328
           R +RFL L
Sbjct: 60  RRRRFLRL 67


>ref|XP_003626114.1| hypothetical protein MTR_7g111180 [Medicago truncatula]
           gi|124359446|gb|ABD32856.2| hypothetical protein
           MtrDRAFT_AC149038g29v2 [Medicago truncatula]
           gi|355501129|gb|AES82332.1| hypothetical protein
           MTR_7g111180 [Medicago truncatula]
          Length = 114

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 10/105 (9%)
 Frame = +2

Query: 77  MSYVPIFRSESM--------SYTDMEKRQLFLRSYHFSRKKSLSDKIKISFFRVKKVIRV 232
           M+  P+FRS+S         +YT MEKRQLFLRSY F RKKS S++IK SF R++KV+  
Sbjct: 17  MNTSPLFRSDSFGYYSHEQHNYTLMEKRQLFLRSYQFIRKKSFSERIKGSFVRLRKVV-- 74

Query: 233 RLRSAKKIRKI--AWFKLKHSFLFTSRNKRFLPLPYKKNTYNCLC 361
            +RSA+K R++  + FK+K  F +   + +F     K    +CLC
Sbjct: 75  -IRSARKFRRLEFSMFKIKCGFYYRRYHNKF----QKSQFSSCLC 114


>ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arabidopsis lyrata subsp.
           lyrata] gi|297330384|gb|EFH60803.1| hypothetical protein
           ARALYDRAFT_896695 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 39/78 (50%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
 Frame = +2

Query: 125 MEKRQLFLRSYHFSRKKSLSDKIKISFFRV-KKVIRVRLRSAKKIRKIAWFKLKHSFLFT 301
           +EKRQLFL+SY FSRK+SL++KIKIS  RV KKV+ +RL+SA++++++ W + K +F + 
Sbjct: 23  VEKRQLFLKSYQFSRKQSLTEKIKISVKRVAKKVVWMRLKSARRLKRVVWSRFKTAFFY- 81

Query: 302 SRNKRFLPL--PYKKNTY 349
            R +RF  L  P K ++Y
Sbjct: 82  -RRRRFFRLLHPNKPSSY 98


>gb|AAM64547.1| unknown [Arabidopsis thaliana]
          Length = 99

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 36/77 (46%), Positives = 52/77 (67%)
 Frame = +2

Query: 125 MEKRQLFLRSYHFSRKKSLSDKIKISFFRVKKVIRVRLRSAKKIRKIAWFKLKHSFLFTS 304
           MEKRQLFLRSY FSRK+S ++K+  S  RVK+V+  RLRSA K++++ W +L+ +F +  
Sbjct: 24  MEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTRLRSAPKLKRVVWSRLRSAFYY-- 81

Query: 305 RNKRFLPLPYKKNTYNC 355
           R +RF  L +      C
Sbjct: 82  RRRRFFRLLHLHEPXYC 98


Top