BLASTX nr result

ID: Cnidium21_contig00031160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031160
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247...   178   1e-42
ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782...   169   3e-40
ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago ...   160   3e-37
ref|XP_002329950.1| tubulin gamma complex-associated protein [Po...   159   4e-37
ref|XP_004141369.1| PREDICTED: uncharacterized protein LOC101221...   158   1e-36

>ref|XP_002282254.1| PREDICTED: uncharacterized protein LOC100247210 [Vitis vinifera]
          Length = 1023

 Score =  178 bits (451), Expect = 1e-42
 Identities = 110/256 (42%), Positives = 147/256 (57%), Gaps = 35/256 (13%)
 Frame = -3

Query: 670  LPCIQGLDSWLFEGILNDPFEEMFFYANKAIGIDEAEFWEKSYLLR-----SIHYQKLVD 506
            LP I+GLDSWL+EG L+DP  EMFFYANK I IDEAEFWEKSYLLR      +    ++ 
Sbjct: 244  LPYIEGLDSWLYEGTLDDPCNEMFFYANKTISIDEAEFWEKSYLLRPLQSLDVELSAMIG 303

Query: 505  NATEIKA--DNQENMGKKSSSVGANAKGKEHAGRDFQACPLFIKDIGKEIISAGKSLQLI 332
             ++ + +  D +E  G++S S  ++ KGKE + +D + CPLF++DI K IISAGKSLQLI
Sbjct: 304  TSSRLPSTNDKKEMAGRESISTSSSMKGKEQSSKDLKLCPLFVEDIAKPIISAGKSLQLI 363

Query: 331  RHAPKTHLGISGRN--EEIS-----------------QSKSQFTLSEVFCVSLAALIGQG 209
            RH P      SGR    EI+                 QS +  TLSE+FCVSL  LIG G
Sbjct: 364  RHVPMMTSAPSGRKSVHEINGFGSSYDGNISSKIHRGQSIAGLTLSEIFCVSLVGLIGHG 423

Query: 208  NHISEDMWQDD----TIVSLFQSSVETCKSEE-TIKSMSGVKCLKKL----LVDTSPWKR 56
            +HIS+  W +D     I SLF+S ++    E+   +S+  + C +K+    LV+T   K 
Sbjct: 424  DHISKYFWLEDPCNPKIFSLFESHMDKQNLEKGNGESLPNLACSEKIWFKFLVETLLQKG 483

Query: 55   ENGFNNMQNLVRDSTD 8
            E  F +      D  D
Sbjct: 484  EIDFGSKHKNANDFHD 499


>ref|XP_003527712.1| PREDICTED: uncharacterized protein LOC100782299 [Glycine max]
          Length = 1002

 Score =  169 bits (429), Expect = 3e-40
 Identities = 103/236 (43%), Positives = 132/236 (55%), Gaps = 31/236 (13%)
 Frame = -3

Query: 670 LPCIQGLDSWLFEGILNDPFEEMFFYANKAIGIDEAEFWEKSYLLRSIHYQKLVDN---- 503
           LP I+GLDSWLFEGIL+DPF EMFF+ NK + +DEAEFWEKSYLLR + + KL       
Sbjct: 230 LPYIEGLDSWLFEGILDDPFGEMFFFTNKEVSVDEAEFWEKSYLLRRLQHSKLDSEFFSS 289

Query: 502 ----ATEIKADNQENMGKKSS-SVGANAKGKEHAGRDFQACPLFIKDIGKEIISAGKSLQ 338
                  + A N + M ++ S S+ +  KGKE + RD  ACP FIKD+ K I+SAGKSLQ
Sbjct: 290 TNYVNDSVPASNDKEMDRRDSISLSSTVKGKEPSIRDRPACPFFIKDLTKSIVSAGKSLQ 349

Query: 337 LIRHAPKTHLGIS-GRNEEI------------SQSKSQFTLSEVFCVSLAALIGQGNHIS 197
           L+RH P   +  S G N EI            SQ  +  TL EVF VSL  L+G G+H+ 
Sbjct: 350 LMRHVPDCSVNCSKGSNYEIGNTKCLNYGLYPSQRMTGLTLPEVFSVSLVGLVGHGDHVC 409

Query: 196 EDMWQDDTIVSLFQSS---------VETCKSEETIKSMSGVKCLKKLLVDTSPWKR 56
           +  WQD+   S+  SS          +   +E+ I      K   K L+DT   KR
Sbjct: 410 KYFWQDNWYESVSVSSNVSHVNEEKADNDNTEKLIAPPYSEKTWYKFLIDTLFQKR 465


>ref|XP_003602994.1| Gamma-tubulin complex component 4 [Medicago truncatula]
           gi|355492042|gb|AES73245.1| Gamma-tubulin complex
           component 4 [Medicago truncatula]
          Length = 1076

 Score =  160 bits (404), Expect = 3e-37
 Identities = 99/235 (42%), Positives = 137/235 (58%), Gaps = 30/235 (12%)
 Frame = -3

Query: 670 LPCIQGLDSWLFEGILNDPFEEMFFYANKAIGIDEAEFWEKSYLLRSIHYQK-------L 512
           LP I+GLDSWLF+GIL+DP ++MFF+ANK + + EAEFWEKS L+R + ++K        
Sbjct: 230 LPYIEGLDSWLFDGILDDPSDQMFFFANKEVSVAEAEFWEKSCLIRKLQHRKSDTELSST 289

Query: 511 VDNATEIKADNQ-ENMGKKSS-SVGANAKGKEHAGRDFQACPLFIKDIGKEIISAGKSLQ 338
           +     I A N+ + MG + S S+ +  KGK+ + RD  ACPLFIKD+ K IISAGKSLQ
Sbjct: 290 IYAGDSIPASNEKKEMGMRDSISLSSTIKGKDQSVRDCPACPLFIKDLAKSIISAGKSLQ 349

Query: 337 LIRHAPKTHLGIS-GRNEEISQSKS------------QFTLSEVFCVSLAALIGQGNHI- 200
           L+RHAP +    S G N +   +KS              TLSE+F VSLA LIG G+H+ 
Sbjct: 350 LMRHAPSSLAACSKGSNFKFGSTKSLNYGLSPSHRVAGLTLSEIFSVSLAGLIGHGDHVC 409

Query: 199 ---SEDMWQDDTIVSLFQSSVETCKSEETIKSMS----GVKCLKKLLVDTSPWKR 56
               +D W +   VS F S +     ++  ++++      K   K L+DT   KR
Sbjct: 410 KYFCQDDWHESVSVSSFVSYLNLNAEKKDNQNLTAPPYSEKIWYKFLIDTLSQKR 464


>ref|XP_002329950.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222871972|gb|EEF09103.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 977

 Score =  159 bits (403), Expect = 4e-37
 Identities = 88/183 (48%), Positives = 118/183 (64%), Gaps = 18/183 (9%)
 Frame = -3

Query: 670 LPCIQGLDSWLFEGILNDPFEEMFFYANKAIGIDEAEFWEKSYLLRSIHYQKLVDNATEI 491
           +P I+GLDSWLFEG L+DPFEEMFFYAN+AI +D++EFWEKSY LR +  +KL  N++  
Sbjct: 223 VPYIEGLDSWLFEGTLDDPFEEMFFYANRAISVDKSEFWEKSYQLRRLQCRKLDINSSIP 282

Query: 490 KADNQENMGKKSS-SVGANAKGKEHAGRDFQACPLFIKDIGKEIISAGKSLQLIRHAP-- 320
            ++N+  MG+K S       KGKE   ++   CPLFIK+I K I+SAGKSLQLIRH P  
Sbjct: 283 LSNNKTGMGEKDSIPFSEFKKGKELNVKELLVCPLFIKEISKSIVSAGKSLQLIRHVPIS 342

Query: 319 ---------KTHLGISGRNEEIS------QSKSQFTLSEVFCVSLAALIGQGNHISEDMW 185
                     T + + G + + S      Q+ +  TLSE+FCVS+A LIG G+HI     
Sbjct: 343 FSMMFEKRRHTDINVFGGSSDDSGLSICRQTFAGLTLSEIFCVSVAGLIGHGDHIFRYFL 402

Query: 184 QDD 176
           Q++
Sbjct: 403 QNE 405


>ref|XP_004141369.1| PREDICTED: uncharacterized protein LOC101221298 [Cucumis sativus]
           gi|449498744|ref|XP_004160621.1| PREDICTED:
           uncharacterized protein LOC101229679 [Cucumis sativus]
          Length = 984

 Score =  158 bits (399), Expect = 1e-36
 Identities = 93/198 (46%), Positives = 123/198 (62%), Gaps = 7/198 (3%)
 Frame = -3

Query: 670 LPCIQGLDSWLFEGILNDPFEEMFFYANKAIGIDEAEFWEKSYLLRSIHYQKLVDNATEI 491
           LP I+ LDSW+FEGIL+DPFEE+FFYAN+A+ +DE +FWEKSY LRS+     V+    I
Sbjct: 228 LPYIEELDSWVFEGILDDPFEELFFYANEAVSVDEHDFWEKSYSLRSLRLDGEVN--LSI 285

Query: 490 KADNQENMGKKSSSVGANAKGKEHAGRDFQACPLFIKDIGKEIISAGKSLQLIRHAPKTH 311
           K +  E   +KS S+    KGK+       ACPLF+KDI K I++AGKSLQLIRH  +T 
Sbjct: 286 KKETSE---RKSISLSHLLKGKDQYTGGSIACPLFMKDIAKSIVAAGKSLQLIRHVCETS 342

Query: 310 LGISGRNEE-------ISQSKSQFTLSEVFCVSLAALIGQGNHISEDMWQDDTIVSLFQS 152
                +N E          S ++ +LSE+FCVSLA LIG G+HIS   W+ D      Q 
Sbjct: 343 PASEKQNGEEFTASGDFGGSLARLSLSELFCVSLAGLIGDGDHISRYFWKHD------QY 396

Query: 151 SVETCKSEETIKSMSGVK 98
           ++ET  S +T  + S V+
Sbjct: 397 NLETVSSFKTRTNCSEVE 414


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