BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031141
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris]                          358   8e-97
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   320   3e-85
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   320   3e-85
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   319   7e-85
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         317   2e-84

>emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris]
          Length = 374

 Score =  358 bits (920), Expect = 8e-97
 Identities = 171/258 (66%), Positives = 207/258 (80%)
 Frame = +3

Query: 9   ILKKFRMEHCNPVATPMELGTKLSKFEGGNSVEANLYQSLVGSLRYLTCTRPDIAYSVGI 188
           ILKK++ME+CNPV+ PME G KLSKF+GG  V+A+ Y+SLVGSLRYLTCTRPD++ SVG 
Sbjct: 118 ILKKYKMENCNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSVGT 177

Query: 189 VSRFMEDPKQSHWNAIKRILRYIQGTKSLGLFYSRTENYKLLGYSESDWCGDVDERKSTS 368
           +SRFME+P  SHW A+KR+LRYIQGT SLGLFYS+ E+YKL+GYS+SDWCGD+D+ KSTS
Sbjct: 178 ISRFMEEPVYSHWKALKRVLRYIQGTVSLGLFYSKAEDYKLVGYSDSDWCGDIDDPKSTS 237

Query: 369 GYLFFMGDTAFTWYSKKQPIVALSTCEAEYVAASCCVCHAIWXXXXXXXXXXXXXXXTEI 548
           GY+FFMG+TAF+W SKKQPIV LSTCE EYV     VCHAIW               T I
Sbjct: 238 GYVFFMGNTAFSWLSKKQPIVTLSTCEREYVEHLGVVCHAIWLRNLLSKMDVKQLDATVI 297

Query: 549 RIDNKSAIELAKNPVHHERSKHIDVRFHFIREHVKEKKVHLRHVASRDQVADVLTKPMSK 728
           ++DNKSAIELAKNPV+HERSKHIDVRFHFIR+HVK+  V L HVAS+DQVAD+ TKP+ K
Sbjct: 298 QVDNKSAIELAKNPVNHERSKHIDVRFHFIRDHVKKGIVELVHVASQDQVADI-TKPLPK 356

Query: 729 ALLDTYKRMMGMKDRKEL 782
              D +K+M+GM D + +
Sbjct: 357 VFFDKFKKMIGMMDGRNI 374


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  320 bits (820), Expect = 3e-85
 Identities = 153/252 (60%), Positives = 190/252 (75%)
 Frame = +3

Query: 9    ILKKFRMEHCNPVATPMELGTKLSKFEGGNSVEANLYQSLVGSLRYLTCTRPDIAYSVGI 188
            +LKKF+M+  NPV TPME G KLSK E G  V+   ++SLVGSLRYLTCTRPDI Y+VG+
Sbjct: 1090 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149

Query: 189  VSRFMEDPKQSHWNAIKRILRYIQGTKSLGLFYSRTENYKLLGYSESDWCGDVDERKSTS 368
            VSR+ME P  +H+ A KRILRYI+GT + GL YS T +YKL+GYS+SDW GDVD+RKSTS
Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209

Query: 369  GYLFFMGDTAFTWYSKKQPIVALSTCEAEYVAASCCVCHAIWXXXXXXXXXXXXXXXTEI 548
            G++F++GDTAFTW SKKQPIV LSTCEAEYVAA+ CVCHAIW               T+I
Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269

Query: 549  RIDNKSAIELAKNPVHHERSKHIDVRFHFIREHVKEKKVHLRHVASRDQVADVLTKPMSK 728
             +DNKSAI LAKNPV H+RSKHID R+H+IRE V +K V L +V + DQVAD+ TKP+ +
Sbjct: 1270 FVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKR 1329

Query: 729  ALLDTYKRMMGM 764
                  + ++G+
Sbjct: 1330 EDFIKMRSLLGV 1341


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  320 bits (820), Expect = 3e-85
 Identities = 153/252 (60%), Positives = 190/252 (75%)
 Frame = +3

Query: 9    ILKKFRMEHCNPVATPMELGTKLSKFEGGNSVEANLYQSLVGSLRYLTCTRPDIAYSVGI 188
            +LKKF+M+  NPV TPME G KLSK E G  V+   ++SLVGSLRYLTCTRPDI Y+VG+
Sbjct: 1058 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1117

Query: 189  VSRFMEDPKQSHWNAIKRILRYIQGTKSLGLFYSRTENYKLLGYSESDWCGDVDERKSTS 368
            VSR+ME P  +H+ A KRILRYI+GT + GL YS T +YKL+GYS+SDW GDVD+RKSTS
Sbjct: 1118 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1177

Query: 369  GYLFFMGDTAFTWYSKKQPIVALSTCEAEYVAASCCVCHAIWXXXXXXXXXXXXXXXTEI 548
            G++F++GDTAFTW SKKQPIV LSTCEAEYVAA+ CVCHAIW               T+I
Sbjct: 1178 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1237

Query: 549  RIDNKSAIELAKNPVHHERSKHIDVRFHFIREHVKEKKVHLRHVASRDQVADVLTKPMSK 728
             +DNKSAI LAKNPV H+RSKHID R+H+IRE V +K V L +V + DQVAD+ TKP+ +
Sbjct: 1238 FVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKR 1297

Query: 729  ALLDTYKRMMGM 764
                  + ++G+
Sbjct: 1298 EDFIKMRSLLGV 1309


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  319 bits (817), Expect = 7e-85
 Identities = 153/252 (60%), Positives = 189/252 (75%)
 Frame = +3

Query: 9    ILKKFRMEHCNPVATPMELGTKLSKFEGGNSVEANLYQSLVGSLRYLTCTRPDIAYSVGI 188
            +LKKF+M+  NPV TPME G KLSK E G  V+   ++SLVGSLRYLTCTRPDI Y+VG+
Sbjct: 1090 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149

Query: 189  VSRFMEDPKQSHWNAIKRILRYIQGTKSLGLFYSRTENYKLLGYSESDWCGDVDERKSTS 368
            VSR+ME P  +H+ A KRILRYI+GT + GL YS T +YKL+GYS+SDW GDVD+RKSTS
Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209

Query: 369  GYLFFMGDTAFTWYSKKQPIVALSTCEAEYVAASCCVCHAIWXXXXXXXXXXXXXXXTEI 548
            G++F++GDTAFTW SKKQPIV LSTCEAEYVAA+ CVCHAIW               T+I
Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269

Query: 549  RIDNKSAIELAKNPVHHERSKHIDVRFHFIREHVKEKKVHLRHVASRDQVADVLTKPMSK 728
             +DNKSAI LAKNPV H+RSKHID R+H+IRE V +K V L +V + DQVAD  TKP+ +
Sbjct: 1270 FVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKR 1329

Query: 729  ALLDTYKRMMGM 764
                  + ++G+
Sbjct: 1330 ENFIKMRSLLGV 1341


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  317 bits (813), Expect = 2e-84
 Identities = 152/252 (60%), Positives = 189/252 (75%)
 Frame = +3

Query: 9    ILKKFRMEHCNPVATPMELGTKLSKFEGGNSVEANLYQSLVGSLRYLTCTRPDIAYSVGI 188
            +LKKF+++  NPV TPME G KLSK E G  V+   ++SLVGSLRYLTCTRPDI Y+VG+
Sbjct: 1090 VLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149

Query: 189  VSRFMEDPKQSHWNAIKRILRYIQGTKSLGLFYSRTENYKLLGYSESDWCGDVDERKSTS 368
            VSR+ME P  +H+ A KRILRYI+GT + GL YS T +YKL+GYS+SDW GDVD+RKSTS
Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209

Query: 369  GYLFFMGDTAFTWYSKKQPIVALSTCEAEYVAASCCVCHAIWXXXXXXXXXXXXXXXTEI 548
            G++F++GDTAFTW SKKQPIV LSTCEAEYVAA+ CVCHAIW               T+I
Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269

Query: 549  RIDNKSAIELAKNPVHHERSKHIDVRFHFIREHVKEKKVHLRHVASRDQVADVLTKPMSK 728
             +DNKSAI LAKNPV H+RSKHID R+H+IRE V +K V L +V + DQVAD  TKP+ +
Sbjct: 1270 FVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKR 1329

Query: 729  ALLDTYKRMMGM 764
                  + ++G+
Sbjct: 1330 ENFIKMRSLLGV 1341