BLASTX nr result

ID: Cnidium21_contig00031095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031095
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36966.3| unnamed protein product [Vitis vinifera]               55   4e-06
ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containi...    55   4e-06

>emb|CBI36966.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/74 (44%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 35  LSLPTFSTNPRNVSAP--APPHIQXXXXXXXXXXXXAKSSSGLAASDFSGRRSTRYVSKM 208
           +SL     +PRN + P  A P                  S     +DFSGRRSTR+VSKM
Sbjct: 41  VSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSPLPPSKSELTADFSGRRSTRFVSKM 100

Query: 209 HFGRKKTANASRHT 250
           HFGR KTA A+RHT
Sbjct: 101 HFGRPKTAAAARHT 114


>ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 33/74 (44%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
 Frame = +2

Query: 35  LSLPTFSTNPRNVSAP--APPHIQXXXXXXXXXXXXAKSSSGLAASDFSGRRSTRYVSKM 208
           +SL     +PRN + P  A P                  S     +DFSGRRSTR+VSKM
Sbjct: 41  VSLTNPLPSPRNAAKPGAASPATATNRNSNFPSLSPLPPSKSELTADFSGRRSTRFVSKM 100

Query: 209 HFGRKKTANASRHT 250
           HFGR KTA A+RHT
Sbjct: 101 HFGRPKTAAAARHT 114


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