BLASTX nr result

ID: Cnidium21_contig00031083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031083
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|2...   169   5e-40
gb|ACB20696.1| putative cold-inducible protein [Camellia sinensis]    169   5e-40
ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [V...   164   2e-38
ref|XP_002311150.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002528469.1| nucleic acid binding protein, putative [Rici...   161   2e-37

>ref|XP_002316305.1| predicted protein [Populus trichocarpa] gi|222865345|gb|EEF02476.1|
           predicted protein [Populus trichocarpa]
           gi|355477194|gb|AES12473.1| C2H2-type zinc finger
           protein 1 [Populus trichocarpa]
          Length = 179

 Score =  169 bits (429), Expect = 5e-40
 Identities = 94/168 (55%), Positives = 117/168 (69%), Gaps = 11/168 (6%)
 Frame = +3

Query: 114 QRQVESLAMANCLMLLSKFENSDSFAA----------SRVFECKTCNRKFTSFQALGGHR 263
           +R+++S+ MANCLM LSK   S SF +          +RVFECKTCNR+F SFQALGGHR
Sbjct: 7   EREIDSITMANCLMFLSKGRESYSFPSFDHAMSNISPARVFECKTCNRQFPSFQALGGHR 66

Query: 264 ASHKKPKLMAA-GDVLQQVPTKPKTHECSICGVEFALGQALGGHMRRHRAQLEANSNTKL 440
           ASHKKP+LM   G    Q P KPKTHECSICG+EFA+GQALGGHMRRHRA L  N   ++
Sbjct: 67  ASHKKPRLMGGEGSFETQSPAKPKTHECSICGLEFAIGQALGGHMRRHRAAL--NDRNQV 124

Query: 441 DGASDSTTISHETVAAKAVPVLKRSDSSCKRVWGLDLHLRPYDSYLKL 584
           D  +  +T        KAVPV+KRS+S  +RV  LDL+L PY++ ++L
Sbjct: 125 DPLNPPSTDDQ-----KAVPVVKRSNS--RRVLCLDLNLTPYENDMEL 165


>gb|ACB20696.1| putative cold-inducible protein [Camellia sinensis]
          Length = 165

 Score =  169 bits (429), Expect = 5e-40
 Identities = 96/171 (56%), Positives = 119/171 (69%), Gaps = 6/171 (3%)
 Frame = +3

Query: 90  MKRIREDEQRQVESLAMANCLMLLSKF-ENSDSFAASRVFECKTCNRKFTSFQALGGHRA 266
           +KR RED +  VE+LAMANCLMLLS+  E + +    RVF CKTCNR+F+SFQALGGHRA
Sbjct: 6   LKRSREDTE--VEALAMANCLMLLSRVGETTSTKGRDRVFTCKTCNREFSSFQALGGHRA 63

Query: 267 SHKKPKLMAAGDVLQQVPTKP---KTHECSICGVEFALGQALGGHMRRHRAQLEANSNTK 437
           SHKK +LM  GD+  Q P+ P   KTHECSICG+EFA+GQALGGHMRRHR          
Sbjct: 64  SHKKLRLMGGGDLHVQTPSSPVKGKTHECSICGLEFAMGQALGGHMRRHR---------- 113

Query: 438 LDGASDSTTISHETVAAKAVPVLKRSDSS--CKRVWGLDLHLRPYDSYLKL 584
            D +S ST       A   +PVLK+S+SS   KRV  LDL+L PY++++K+
Sbjct: 114 -DSSSPST-------AQAVIPVLKKSNSSNGSKRVLSLDLNLTPYENHMKI 156


>ref|XP_002284111.1| PREDICTED: zinc finger protein ZAT12-like [Vitis vinifera]
          Length = 176

 Score =  164 bits (415), Expect = 2e-38
 Identities = 96/169 (56%), Positives = 116/169 (68%), Gaps = 6/169 (3%)
 Frame = +3

Query: 84  MTMKRIREDEQRQVESLAMANCLMLLSKFENSDSFAA--SRVFECKTCNRKFTSFQALGG 257
           MTMKR+R+ E    ES+++ANCLMLLS+  + DS A   SRVFECKTCNR+F SFQALGG
Sbjct: 1   MTMKRMRDGEH---ESVSIANCLMLLSRGTDYDSIARVPSRVFECKTCNRQFPSFQALGG 57

Query: 258 HRASHKKPKLMAA-GD---VLQQVPTKPKTHECSICGVEFALGQALGGHMRRHRAQLEAN 425
           HRASHKKP+LMA  GD    LQ  P KPKTHECSICG+EFA+GQALGGHMRRHRA     
Sbjct: 58  HRASHKKPRLMALNGDDPAQLQSSPLKPKTHECSICGLEFAIGQALGGHMRRHRAAASGA 117

Query: 426 SNTKLDGASDSTTISHETVAAKAVPVLKRSDSSCKRVWGLDLHLRPYDS 572
           +         S T S  +      P+LK+ +S  +RV  LDL+L P ++
Sbjct: 118 TQAL------SETTSSSSPPPPQAPLLKKPNS--RRVLCLDLNLTPLEN 158


>ref|XP_002311150.1| predicted protein [Populus trichocarpa] gi|222850970|gb|EEE88517.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  164 bits (415), Expect = 2e-38
 Identities = 93/167 (55%), Positives = 113/167 (67%), Gaps = 11/167 (6%)
 Frame = +3

Query: 117 RQVESLAMANCLMLLSKFENSDSFAA----------SRVFECKTCNRKFTSFQALGGHRA 266
           R+++S+ MANCL+ LSK   S SF +          SRVFECKTCNRKF SFQALGGHRA
Sbjct: 8   REIDSITMANCLVFLSKGRESYSFPSFDHAINNNSPSRVFECKTCNRKFPSFQALGGHRA 67

Query: 267 SHKKPKLMAA-GDVLQQVPTKPKTHECSICGVEFALGQALGGHMRRHRAQLEANSNTKLD 443
           SHKKPKLM   G    Q P KPKTHECSICG+EFA+GQALGGHMRRHRA L  N   +L 
Sbjct: 68  SHKKPKLMGGEGSFESQSPAKPKTHECSICGLEFAIGQALGGHMRRHRAAL--NDQNQLA 125

Query: 444 GASDSTTISHETVAAKAVPVLKRSDSSCKRVWGLDLHLRPYDSYLKL 584
                 +  H+ V    VPV+K+S+S  +RV  LDL+L P ++ ++L
Sbjct: 126 DPLSPPSSDHKQV----VPVVKKSNS--RRVLCLDLNLTPNENDMEL 166


>ref|XP_002528469.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223532145|gb|EEF33952.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 190

 Score =  161 bits (407), Expect = 2e-37
 Identities = 91/177 (51%), Positives = 117/177 (66%), Gaps = 16/177 (9%)
 Frame = +3

Query: 102 REDEQRQVESLAMANCLMLLSKFENSDSF------------AASRVFECKTCNRKFTSFQ 245
           R   + +++SL+MANCLMLLS+     SF            +++RVFECKTCNR+F SFQ
Sbjct: 3   RSFREAEIDSLSMANCLMLLSQGREIVSFPSFEAMKGTNINSSNRVFECKTCNRQFPSFQ 62

Query: 246 ALGGHRASHKKPKLMAAGDV----LQQVPTKPKTHECSICGVEFALGQALGGHMRRHRAQ 413
           ALGGHRASHKKP+L   GDV     Q  P KPKTHECSICG+EFA+GQALGGHMRRHRA 
Sbjct: 63  ALGGHRASHKKPRL-TNGDVGSLETQSSPAKPKTHECSICGLEFAIGQALGGHMRRHRAI 121

Query: 414 LEANSNTKLDGASDSTTISHETVAAKAVPVLKRSDSSCKRVWGLDLHLRPYDSYLKL 584
              +S+      + S  +     A  A PV+K+S+S  +RV  LDL+L PY++ ++L
Sbjct: 122 NNDSSSLSTPSPTSSAELMAVKPAGVAPPVMKKSNS--RRVLCLDLNLTPYENDVEL 176


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