BLASTX nr result
ID: Cnidium21_contig00031079
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00031079 (499 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003590895.1| F-box protein PP2-B1 [Medicago truncatula] g... 62 5e-08 ref|XP_003521789.1| PREDICTED: F-box protein PP2-B1-like [Glycin... 60 2e-07 gb|ACU24047.1| unknown [Glycine max] 60 2e-07 ref|XP_003590893.1| F-box protein PP2-B1 [Medicago truncatula] g... 59 5e-07 ref|XP_003590891.1| F-box family-like protein [Medicago truncatu... 58 9e-07 >ref|XP_003590895.1| F-box protein PP2-B1 [Medicago truncatula] gi|355479943|gb|AES61146.1| F-box protein PP2-B1 [Medicago truncatula] Length = 274 Score = 62.0 bits (149), Expect = 5e-08 Identities = 40/92 (43%), Positives = 52/92 (56%) Frame = +1 Query: 223 MNALPQELIEEIVSRTSPVDMCGKLSIVSRSFQSAAIPDHVWERFLPADLISRRAMSNKS 402 + ALP+ I +I+S T+PVD C +LS+VS SF SAA D VW+RFLP+DLIS + S + Sbjct: 8 IEALPEGCIAKILSHTTPVDSC-RLSLVSNSFCSAAESDIVWDRFLPSDLISIVSDSQSA 66 Query: 403 HDWIFGDEDPWNKIDSDTLQAFPTKKDLYLFL 498 S P+KK LYL L Sbjct: 67 ---------------SSLFTTSPSKKSLYLTL 83 >ref|XP_003521789.1| PREDICTED: F-box protein PP2-B1-like [Glycine max] Length = 317 Score = 59.7 bits (143), Expect = 2e-07 Identities = 38/89 (42%), Positives = 50/89 (56%) Frame = +1 Query: 232 LPQELIEEIVSRTSPVDMCGKLSIVSRSFQSAAIPDHVWERFLPADLISRRAMSNKSHDW 411 LP+ I IVS T+P D C LS+VS SF+SA++ D VWERFLP+D + + S+K Sbjct: 26 LPEGCIANIVSFTTPPDAC-VLSLVSSSFRSASVTDFVWERFLPSDYQAIISQSSK---- 80 Query: 412 IFGDEDPWNKIDSDTLQAFPTKKDLYLFL 498 TL + +KKDLYL L Sbjct: 81 ------------PSTLTNYSSKKDLYLHL 97 >gb|ACU24047.1| unknown [Glycine max] Length = 252 Score = 59.7 bits (143), Expect = 2e-07 Identities = 38/89 (42%), Positives = 50/89 (56%) Frame = +1 Query: 232 LPQELIEEIVSRTSPVDMCGKLSIVSRSFQSAAIPDHVWERFLPADLISRRAMSNKSHDW 411 LP+ I IVS T+P D C LS+VS SF+SA++ D VWERFLP+D + + S+K Sbjct: 26 LPEGCIANIVSFTTPPDAC-VLSLVSSSFRSASVTDFVWERFLPSDYQAIISQSSK---- 80 Query: 412 IFGDEDPWNKIDSDTLQAFPTKKDLYLFL 498 TL + +KKDLYL L Sbjct: 81 ------------PSTLTNYSSKKDLYLHL 97 >ref|XP_003590893.1| F-box protein PP2-B1 [Medicago truncatula] gi|355479941|gb|AES61144.1| F-box protein PP2-B1 [Medicago truncatula] Length = 280 Score = 58.5 bits (140), Expect = 5e-07 Identities = 38/92 (41%), Positives = 52/92 (56%) Frame = +1 Query: 223 MNALPQELIEEIVSRTSPVDMCGKLSIVSRSFQSAAIPDHVWERFLPADLISRRAMSNKS 402 + LP+ I +I+S T+PVD C +LS+V + F SAA D VW+RFLP+DLIS Sbjct: 12 IEVLPEGCIAKILSHTAPVDSC-RLSLVCKGFCSAAKSDTVWDRFLPSDLIS-------- 62 Query: 403 HDWIFGDEDPWNKIDSDTLQAFPTKKDLYLFL 498 I D + + S + P+KK LYL L Sbjct: 63 ---IISDSPSASSLFSTS----PSKKSLYLTL 87 >ref|XP_003590891.1| F-box family-like protein [Medicago truncatula] gi|355479939|gb|AES61142.1| F-box family-like protein [Medicago truncatula] Length = 341 Score = 57.8 bits (138), Expect = 9e-07 Identities = 38/89 (42%), Positives = 51/89 (57%) Frame = +1 Query: 232 LPQELIEEIVSRTSPVDMCGKLSIVSRSFQSAAIPDHVWERFLPADLISRRAMSNKSHDW 411 LP+ I IVSRT+P+D G+LS+ S++F+SA+ D VW +FLP+D+ S SH Sbjct: 7 LPEGCIAAIVSRTTPLD-AGRLSVFSKTFRSASDSDAVWNQFLPSDI-----SSIISH-- 58 Query: 412 IFGDEDPWNKIDSDTLQAFPTKKDLYLFL 498 S +L PTKKDLYL L Sbjct: 59 ------------SPSLTNIPTKKDLYLAL 75