BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00031053
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198390.2| tRNA pseudouridine synthase-like protein [Arabi...    94   9e-18
ref|NP_001190423.1| tRNA pseudouridine synthase-like protein [Ar...    94   9e-18
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...    94   1e-17
ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-lik...    94   1e-17
ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17

>ref|NP_198390.2| tRNA pseudouridine synthase-like protein [Arabidopsis thaliana]
           gi|27311599|gb|AAO00765.1| putative protein [Arabidopsis
           thaliana] gi|30725698|gb|AAP37871.1| At5g35400
           [Arabidopsis thaliana] gi|332006580|gb|AED93963.1| tRNA
           pseudouridine synthase-like protein [Arabidopsis
           thaliana]
          Length = 420

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/117 (44%), Positives = 73/117 (62%), Gaps = 9/117 (7%)
 Frame = -3

Query: 325 IEEAVNDAGPGKLRVISVSEVSRAFHPNFSAKWRRYIYVFPLNNEKEESSQHEDAENDVF 146
           IE+A+N    GKLRV+S+S+VSR+FHPNFSAKWRRY+Y+FPL++ +      E+ EN +F
Sbjct: 180 IEDAINKDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIF 239

Query: 145 DGGKK---------NAFDEVHMALEDSGVLADNYNTETRFVKKLNSFSVKKVDLLLR 2
           D  KK            +EV M+ ED  +  +  +     V+K + FSV KVD LL+
Sbjct: 240 DENKKKQRNGLLSEEIAEEVIMS-EDDELEIEETSNALEVVEKPSDFSVSKVDQLLQ 295


>ref|NP_001190423.1| tRNA pseudouridine synthase-like protein [Arabidopsis thaliana]
           gi|332006581|gb|AED93964.1| tRNA pseudouridine
           synthase-like protein [Arabidopsis thaliana]
          Length = 471

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/117 (44%), Positives = 73/117 (62%), Gaps = 9/117 (7%)
 Frame = -3

Query: 325 IEEAVNDAGPGKLRVISVSEVSRAFHPNFSAKWRRYIYVFPLNNEKEESSQHEDAENDVF 146
           IE+A+N    GKLRV+S+S+VSR+FHPNFSAKWRRY+Y+FPL++ +      E+ EN +F
Sbjct: 180 IEDAINKDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIF 239

Query: 145 DGGKK---------NAFDEVHMALEDSGVLADNYNTETRFVKKLNSFSVKKVDLLLR 2
           D  KK            +EV M+ ED  +  +  +     V+K + FSV KVD LL+
Sbjct: 240 DENKKKQRNGLLSEEIAEEVIMS-EDDELEIEETSNALEVVEKPSDFSVSKVDQLLQ 295


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 56/118 (47%), Positives = 77/118 (65%), Gaps = 6/118 (5%)
 Frame = -3

Query: 337 KAQDIEEAVNDAGPGKLRVISVSEVSRAFHPNFSAKWRRYIYVFPLN--NEKEESSQHE- 167
           K QDIE+A+N A PGKLRVISVSEVSR FHPNFSAKWR Y Y+FPLN  ++ E+ S++E 
Sbjct: 191 KVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISENEM 250

Query: 166 DAENDVFD---GGKKNAFDEVHMALEDSGVLADNYNTETRFVKKLNSFSVKKVDLLLR 2
           D +   F+   G + +     +   E++  L  + + E    KK ++FS+ +VD LLR
Sbjct: 251 DIQKISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQLLR 308


>ref|XP_003532450.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 404

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 54/112 (48%), Positives = 68/112 (60%)
 Frame = -3

Query: 337 KAQDIEEAVNDAGPGKLRVISVSEVSRAFHPNFSAKWRRYIYVFPLNNEKEESSQHEDAE 158
           K +DIE+A+N A PGKLRVISVSEVSR FHPNFSAKWRRY+Y+FPL N        ++ E
Sbjct: 180 KPRDIEDAINHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTNGGYTDQSSDNGE 239

Query: 157 NDVFDGGKKNAFDEVHMALEDSGVLADNYNTETRFVKKLNSFSVKKVDLLLR 2
              +D  K   ++E+H          D    E    KK  +FS+ KV+ LLR
Sbjct: 240 --FYDSFK---YNEIH-----DSASKDELENE----KKSYAFSISKVNRLLR 277


>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/123 (43%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
 Frame = -3

Query: 337 KAQDIEEAVNDAGPGKLRVISVSEVSRAFHPNFSAKWRRYIYVFPLNNEK---------- 188
           K  +IE+A+ND  PGK+RV S+SEVSRAFHPNFSAKWRRY+Y+FPLN+ +          
Sbjct: 188 KPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREEIEGEGG 247

Query: 187 -EESSQHEDAENDVFDGGKKNAFDEVHMALEDSGVLADNYNTETRFVKKLNSFSVKKVDL 11
            E  S HE+ E    + G+  + + V     ++ +++D    E +  KK  SFSV +V+ 
Sbjct: 248 IENFSSHENCEKQRNECGELASEENV-----ENSIISD--EDELQGAKKPRSFSVCRVNQ 300

Query: 10  LLR 2
           LL+
Sbjct: 301 LLQ 303