BLASTX nr result

ID: Cnidium21_contig00030985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030985
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus comm...   271   4e-71
ref|XP_002320585.1| predicted protein [Populus trichocarpa] gi|2...   271   4e-71
gb|ABK93600.1| unknown [Populus trichocarpa]                          269   2e-70
ref|XP_003539372.1| PREDICTED: COP9 signalosome complex subunit ...   262   2e-68
ref|XP_002283011.1| PREDICTED: COP9 signalosome complex subunit ...   262   2e-68

>ref|XP_002510359.1| cop9 complex subunit, putative [Ricinus communis]
           gi|223551060|gb|EEF52546.1| cop9 complex subunit,
           putative [Ricinus communis]
          Length = 397

 Score =  271 bits (693), Expect = 4e-71
 Identities = 139/160 (86%), Positives = 152/160 (95%)
 Frame = +3

Query: 54  MENAFATASAIGDQRQKIEQYKHILSSVISSNDIVQAQKFIQHILSDDVPLVVSRQLLQT 233
           ME+AFA+ASAI DQRQKIEQYKHIL+SVISSNDI QA+KFI H+LSDDVPLVVSRQLLQ+
Sbjct: 1   MESAFASASAITDQRQKIEQYKHILASVISSNDIDQAKKFIDHMLSDDVPLVVSRQLLQS 60

Query: 234 FASDLDKLEPENQKQIANYTLTQIQPRVVSFEEQVLIIREKLAELYESEQEWSKAAHMLS 413
           FA +L +LEP+ QK+IA+YTL QIQPRVVSFEEQVLIIREKLAELYESEQ+WSKAA MLS
Sbjct: 61  FAQELGRLEPDTQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 414 GIDLDSGMRVIDDTFRLTKCVQIARLYLEDDDAVNAEAFI 533
           GIDLDSGMRVIDDTFRL+KCVQIARLYLEDDDAVNAEAFI
Sbjct: 121 GIDLDSGMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFI 160


>ref|XP_002320585.1| predicted protein [Populus trichocarpa] gi|222861358|gb|EEE98900.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  271 bits (693), Expect = 4e-71
 Identities = 140/160 (87%), Positives = 150/160 (93%)
 Frame = +3

Query: 54  MENAFATASAIGDQRQKIEQYKHILSSVISSNDIVQAQKFIQHILSDDVPLVVSRQLLQT 233
           ME  FA+AS I DQRQKIEQYKHILSSVISSNDIVQA+KFI H+LSDDVPLVVSRQLLQT
Sbjct: 1   MEIVFASASTITDQRQKIEQYKHILSSVISSNDIVQAKKFIDHMLSDDVPLVVSRQLLQT 60

Query: 234 FASDLDKLEPENQKQIANYTLTQIQPRVVSFEEQVLIIREKLAELYESEQEWSKAAHMLS 413
           FA +L +LEPE QK+IA+YTL QIQPRVVSFEEQVLIIREKLAELYESEQ+WSKAA MLS
Sbjct: 61  FAHELGRLEPETQKEIAHYTLAQIQPRVVSFEEQVLIIREKLAELYESEQQWSKAAQMLS 120

Query: 414 GIDLDSGMRVIDDTFRLTKCVQIARLYLEDDDAVNAEAFI 533
           GIDLDSGMRVIDD+FRL+KCVQIARLYLEDDDAVNAEAFI
Sbjct: 121 GIDLDSGMRVIDDSFRLSKCVQIARLYLEDDDAVNAEAFI 160


>gb|ABK93600.1| unknown [Populus trichocarpa]
          Length = 397

 Score =  269 bits (687), Expect = 2e-70
 Identities = 138/160 (86%), Positives = 149/160 (93%)
 Frame = +3

Query: 54  MENAFATASAIGDQRQKIEQYKHILSSVISSNDIVQAQKFIQHILSDDVPLVVSRQLLQT 233
           ME AFA ASAI DQRQKIEQYKHILSSV SSNDIVQ++KFI H+LSDDVPLVVSRQLLQT
Sbjct: 1   MEGAFAGASAITDQRQKIEQYKHILSSVFSSNDIVQSKKFIDHMLSDDVPLVVSRQLLQT 60

Query: 234 FASDLDKLEPENQKQIANYTLTQIQPRVVSFEEQVLIIREKLAELYESEQEWSKAAHMLS 413
           FA +L +LEPE +K+IA YTL QIQPRVVSFEEQVLIIREKLAEL+ESEQ+WSKAA MLS
Sbjct: 61  FAHELGRLEPETEKEIAMYTLAQIQPRVVSFEEQVLIIREKLAELFESEQQWSKAAQMLS 120

Query: 414 GIDLDSGMRVIDDTFRLTKCVQIARLYLEDDDAVNAEAFI 533
           GIDLDSGMR+IDDTFRL+KCVQIARLYLEDDDAVNAEAFI
Sbjct: 121 GIDLDSGMRIIDDTFRLSKCVQIARLYLEDDDAVNAEAFI 160


>ref|XP_003539372.1| PREDICTED: COP9 signalosome complex subunit 4-like [Glycine max]
          Length = 397

 Score =  262 bits (670), Expect = 2e-68
 Identities = 135/160 (84%), Positives = 149/160 (93%)
 Frame = +3

Query: 54  MENAFATASAIGDQRQKIEQYKHILSSVISSNDIVQAQKFIQHILSDDVPLVVSRQLLQT 233
           ME+AFA+ASAI DQRQKIEQYK IL++VISSNDIVQA+KFI H+LSDDVPLVVSRQLLQT
Sbjct: 1   MESAFASASAITDQRQKIEQYKQILAAVISSNDIVQARKFIDHMLSDDVPLVVSRQLLQT 60

Query: 234 FASDLDKLEPENQKQIANYTLTQIQPRVVSFEEQVLIIREKLAELYESEQEWSKAAHMLS 413
           FA +L +LEPE QK+IA+Y L QIQPRVVSFEEQVL+IREKLAELYESE++WSKAA MLS
Sbjct: 61  FAQELGRLEPEIQKEIAHYALAQIQPRVVSFEEQVLVIREKLAELYESEKQWSKAAQMLS 120

Query: 414 GIDLDSGMRVIDDTFRLTKCVQIARLYLEDDDAVNAEAFI 533
           GIDLDSGMRVIDD FRL+KCVQIA LYLEDDDAVNAEAFI
Sbjct: 121 GIDLDSGMRVIDDAFRLSKCVQIACLYLEDDDAVNAEAFI 160


>ref|XP_002283011.1| PREDICTED: COP9 signalosome complex subunit 4 [Vitis vinifera]
           gi|302142470|emb|CBI19673.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  262 bits (670), Expect = 2e-68
 Identities = 135/160 (84%), Positives = 149/160 (93%)
 Frame = +3

Query: 54  MENAFATASAIGDQRQKIEQYKHILSSVISSNDIVQAQKFIQHILSDDVPLVVSRQLLQT 233
           M++AFA+ASAI DQRQKIEQYK ILSSVI+SNDI QA+KFI H+LSDDVPLVVSRQLLQ 
Sbjct: 1   MDSAFASASAISDQRQKIEQYKLILSSVITSNDIAQARKFIDHMLSDDVPLVVSRQLLQI 60

Query: 234 FASDLDKLEPENQKQIANYTLTQIQPRVVSFEEQVLIIREKLAELYESEQEWSKAAHMLS 413
           FA +L +L+PE QK+IA+YTLTQIQPR VSFEEQVL+IREKLAELYESEQ+WSKAA MLS
Sbjct: 61  FAQELGRLKPEAQKEIAHYTLTQIQPRCVSFEEQVLVIREKLAELYESEQQWSKAAQMLS 120

Query: 414 GIDLDSGMRVIDDTFRLTKCVQIARLYLEDDDAVNAEAFI 533
           GIDLDS MRVIDDTFRL+KCVQIARLYLEDDDAVNAEAFI
Sbjct: 121 GIDLDSTMRVIDDTFRLSKCVQIARLYLEDDDAVNAEAFI 160


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