BLASTX nr result

ID: Cnidium21_contig00030967 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00030967
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525695.1| PREDICTED: nucleolar protein 56-like isoform...    64   1e-10
ref|XP_003525694.1| PREDICTED: nucleolar protein 56-like isoform...    64   1e-10
ref|XP_003549846.1| PREDICTED: nucleolar protein 56-like [Glycin...    64   1e-10
ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-09
ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09

>ref|XP_003525695.1| PREDICTED: nucleolar protein 56-like isoform 2 [Glycine max]
          Length = 556

 Score = 64.3 bits (155), Expect(2) = 1e-10
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = +3

Query: 444 PEIKPGKKNNFSLGVADPELGYNLYEVAKIPCQSTAFIREILLGLDLHIHSYFKD 608
           P++K GKK+ FSLGV+DP++G  + EV KIPCQS  F+ E+L G+  H  ++  D
Sbjct: 84  PKVKEGKKSKFSLGVSDPKIGSQISEVTKIPCQSNEFVSELLRGVRFHFDTFVGD 138



 Score = 28.5 bits (62), Expect(2) = 1e-10
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 287 ERVRDLKDEPDEFKEWVV--EFNKFVSLQDVEQQITAFSGGIVTAELRKFVKSS 442
           E VR+   + + F + V    FN F S  D  +Q  A S GI+T ELR  ++++
Sbjct: 29  EAVRNSVSDLNRFGKVVKLRSFNPFTSALDALKQCNAVSEGILTDELRTVLETN 82


>ref|XP_003525694.1| PREDICTED: nucleolar protein 56-like isoform 1 [Glycine max]
          Length = 550

 Score = 64.3 bits (155), Expect(2) = 1e-10
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = +3

Query: 444 PEIKPGKKNNFSLGVADPELGYNLYEVAKIPCQSTAFIREILLGLDLHIHSYFKD 608
           P++K GKK+ FSLGV+DP++G  + EV KIPCQS  F+ E+L G+  H  ++  D
Sbjct: 84  PKVKEGKKSKFSLGVSDPKIGSQISEVTKIPCQSNEFVSELLRGVRFHFDTFVGD 138



 Score = 28.5 bits (62), Expect(2) = 1e-10
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 287 ERVRDLKDEPDEFKEWVV--EFNKFVSLQDVEQQITAFSGGIVTAELRKFVKSS 442
           E VR+   + + F + V    FN F S  D  +Q  A S GI+T ELR  ++++
Sbjct: 29  EAVRNSVSDLNRFGKVVKLRSFNPFTSALDALKQCNAVSEGILTDELRTVLETN 82


>ref|XP_003549846.1| PREDICTED: nucleolar protein 56-like [Glycine max]
          Length = 549

 Score = 64.3 bits (155), Expect(2) = 1e-10
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = +3

Query: 444 PEIKPGKKNNFSLGVADPELGYNLYEVAKIPCQSTAFIREILLGLDLHIHSYFKD 608
           P++K GKK+ FSLGV+DP++G  + EV KIPCQS  F+ E+L G+  H  ++  D
Sbjct: 84  PKVKEGKKSKFSLGVSDPKIGSQISEVTKIPCQSNEFVSELLRGVRFHFDTFVGD 138



 Score = 28.5 bits (62), Expect(2) = 1e-10
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +2

Query: 287 ERVRDLKDEPDEFKEWVV--EFNKFVSLQDVEQQITAFSGGIVTAELRKFVKSS 442
           E VR+   + + F + V    FN F S  D  +Q  A S GI+T ELR  ++++
Sbjct: 29  EAVRNSVSDLNRFGKVVKLRSFNPFTSALDALKQCNAVSEGILTDELRTVLETN 82


>ref|XP_002318715.1| predicted protein [Populus trichocarpa] gi|222859388|gb|EEE96935.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 29/55 (52%), Positives = 41/55 (74%)
 Frame = +3

Query: 444 PEIKPGKKNNFSLGVADPELGYNLYEVAKIPCQSTAFIREILLGLDLHIHSYFKD 608
           P++K GKK  FSLGVA+P++G +++EV KIPCQS  F+ E+L G+ LH   + KD
Sbjct: 84  PKVKEGKKAKFSLGVAEPKIGSHIFEVTKIPCQSNEFVHELLRGVRLHFERFIKD 138


>ref|XP_002322238.1| predicted protein [Populus trichocarpa] gi|222869234|gb|EEF06365.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 28/55 (50%), Positives = 41/55 (74%)
 Frame = +3

Query: 444 PEIKPGKKNNFSLGVADPELGYNLYEVAKIPCQSTAFIREILLGLDLHIHSYFKD 608
           P++K GKK  FSLGVA+P++G +++EV K+PCQS  F+ E+L G+ LH   + KD
Sbjct: 84  PKVKEGKKAKFSLGVAEPKIGSHIFEVTKLPCQSNDFVHELLRGVRLHFERFIKD 138


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